Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AL109659.3-201ENST00000624985 950 ntBASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.29□□□□□ -1.88
RHBDD3Q9Y3P4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 AC007256.1-201ENST00000392253 2765 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 AC016716.1-201ENST00000265882 708 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 SNORA70.2-201ENST00000364506 135 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 RNA5SP283-201ENST00000365604 119 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 RNU6-213P-201ENST00000384051 104 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 RPL31P1-201ENST00000398116 372 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 OR8F1P-201ENST00000425243 930 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 YWHAZP8-201ENST00000436935 731 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 HSFY6P-201ENST00000445573 403 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 RPS29P31-201ENST00000446147 164 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 NPM1P13-201ENST00000452663 865 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 RPS24P6-201ENST00000452670 400 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 AC108941.1-201ENST00000502853 530 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 BX322635.1-201ENST00000605804 496 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 AC004775.1-201ENST00000607389 753 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 AC092653.1-201ENST00000608509 531 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 ZYXP1-201ENST00000617638 118 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 AC092628.2-201ENST00000622492 339 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 AP003400.6-201ENST00000624698 740 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 RNA5SP196-201ENST00000625967 102 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 ZNF734P-201ENST00000419494 1534 ntBASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.28□□□□□ -1.88
RHBDD3Q9Y3P4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AL355578.1-201ENST00000607405 1328 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 RNA5SP443-201ENST00000363083 132 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 SOD2P1-201ENST00000396543 562 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 SSXP10-201ENST00000402595 565 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 RNU6-272P-201ENST00000411028 104 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 OFD1P18Y-201ENST00000420889 959 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AL049610.1-201ENST00000423374 372 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AL590103.1-201ENST00000434488 307 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 RPL21P89-201ENST00000444021 467 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 CYCSP53-201ENST00000455540 265 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 OR9M1P-201ENST00000459641 921 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 RN7SL385P-201ENST00000468873 276 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 RPS27AP1-201ENST00000475545 471 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 TPT1P3-201ENST00000492841 512 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 HMGB1P22-201ENST00000505315 124 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 RPL12P22-201ENST00000519073 490 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 IGHV3-76-201ENST00000522465 295 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AF279873.1-201ENST00000523393 313 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 AP003385.6-201ENST00000531603 374 ntBASIC3.27□□□□□ -1.89
RHBDD3Q9Y3P4 CR383656.14-201ENST00000551951 406 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms