Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 AC145350.1-201ENST00000567426 208 ntBASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 RN7SL703P-201ENST00000578485 302 ntBASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 MIR3158-1-201ENST00000583596 81 ntBASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 PCNAP1-202ENST00000595299 752 ntBASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 AL392112.1-201ENST00000605115 829 ntBASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 AC022509.4-201ENST00000621404 572 ntBASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 AP006248.2-201ENST00000623309 592 ntBASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 AC068057.2-201ENST00000624047 895 ntBASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 CYP1D1P-201ENST00000416662 1433 ntBASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC6Q9UBN7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 RNU6-560P-201ENST00000364007 108 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 Y_RNA.465-201ENST00000384293 102 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 SFR1P1-201ENST00000403720 688 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 GSTA8P-201ENST00000404253 637 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 MIR1911-201ENST00000410783 80 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 RNU6-272P-201ENST00000411028 104 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 RPS23P10-201ENST00000416185 486 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC004552.1-201ENST00000419089 348 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 OR8F1P-201ENST00000425243 930 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 RPS26P40-201ENST00000435209 294 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 RPS29P7-201ENST00000439662 171 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 ABCF2P2-201ENST00000450549 296 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 RPS26P3-201ENST00000470205 348 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC011979.1-201ENST00000472300 483 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC090543.2-201ENST00000483963 348 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC004057.1-201ENST00000485827 348 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AF213884.1-201ENST00000488102 463 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 MTCYBP35-201ENST00000503630 1137 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC008494.2-201ENST00000514544 370 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 RNA5SP135-201ENST00000517019 125 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 MRPS36P3-201ENST00000519284 130 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 HIGD1AP6-201ENST00000521833 279 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AL390838.2-201ENST00000602394 274 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 DUXAP3-201ENST00000603616 594 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC091488.1-201ENST00000604239 660 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AP003973.1-201ENST00000604639 691 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 DPRXP5-201ENST00000604662 539 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC010200.2-201ENST00000605098 235 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 AC019226.2-201ENST00000625973 424 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 OR11H5P-202ENST00000641612 1325 ntBASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC6Q9UBN7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 RNU6-1279P-201ENST00000383917 103 ntBASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 MIR554-201ENST00000384874 96 ntBASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 MIR3074-201ENST00000384885 81 ntBASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 RNA5SP39-201ENST00000411245 120 ntBASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 CYCSP19-201ENST00000411715 316 ntBASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 RWDD4P2-201ENST00000426392 563 ntBASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.68□□□□□ -1.66
HDAC6Q9UBN7 AL353748.1-201ENST00000440753 474 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms