Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 HMGN1P15-201ENST00000513870 295 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 RNU6-334P-201ENST00000517072 102 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AC091515.1-201ENST00000548110 679 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AC115621.1-201ENST00000604653 858 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AL163642.2-201ENST00000604722 1019 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AC112503.2-201ENST00000609005 552 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AL391261.4-201ENST00000616012 481 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 MIR6864-201ENST00000617935 70 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 NSRP1P1-201ENST00000444067 1693 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 PRELID3BP11-201ENST00000414230 479 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC093578.1-201ENST00000415219 368 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 MTCO2P1-201ENST00000424648 477 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 YME1L1P1-201ENST00000429435 297 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 CYCSP4-201ENST00000429682 331 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AL512637.2-201ENST00000431287 1256 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 HMGB3P22-202ENST00000451823 572 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC091153.1-201ENST00000466297 402 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC073522.1-201ENST00000483312 377 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC005351.1-201ENST00000511152 786 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 RN7SKP96-201ENST00000516948 297 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 NARSP2-201ENST00000518524 679 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 HMGB1P1-201ENST00000522557 636 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC008011.1-201ENST00000545989 227 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 CR383656.14-201ENST00000551951 406 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC011611.5-201ENST00000552477 578 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC074029.1-201ENST00000552531 1044 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AL360157.1-201ENST00000565962 87 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC009101.1-201ENST00000568135 242 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 VN1R79P-201ENST00000593540 513 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC024220.1-201ENST00000603675 484 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 HMGB1P50-201ENST00000605814 607 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 U3.45-201ENST00000607547 219 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC120053.1-201ENST00000607706 736 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC021851.1-201ENST00000608537 1082 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 HSPA8P1-201ENST00000425843 1833 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 XPOTP1-201ENST00000443317 2398 ntBASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.27□□□□□ -1.89
CLCF1Q9UBD9 MTCO1P6-201ENST00000481192 1384 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AC007685.1-201ENST00000329806 452 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 SNORD9-201ENST00000362566 104 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 RNU1-89P-201ENST00000384592 164 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 MIR7-3-201ENST00000384898 110 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 ATP5F1P4-201ENST00000397288 746 ntBASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.26□□□□□ -1.89
CLCF1Q9UBD9 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms