Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC018529.3-201ENST00000624212 2254 ntBASIC4.54□□□□□ -1.68
BLOC1S4Q9NUP1 AC016588.2-201ENST00000632484 3021 ntBASIC4.54□□□□□ -1.68
BLOC1S4Q9NUP1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BLOC1S4Q9NUP1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
BLOC1S4Q9NUP1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
BLOC1S4Q9NUP1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BLOC1S4Q9NUP1 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.54□□□□□ -1.68
BLOC1S4Q9NUP1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 RNA5SP130-201ENST00000364431 114 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 MIR506-201ENST00000384998 124 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 RPS24P12-201ENST00000402084 394 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 RNA5SP306-201ENST00000411087 107 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 HSPE1P12-201ENST00000412576 301 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AL356095.1-201ENST00000417217 199 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AL449283.1-202ENST00000418249 604 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 HIGD1AP12-201ENST00000427832 281 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AC093155.1-201ENST00000440164 826 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 NDUFA5P9-201ENST00000472609 340 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 RPL31P61-201ENST00000496160 376 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 MTCYBP23-201ENST00000558717 1102 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AC025588.3-201ENST00000604182 274 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AC104662.1-201ENST00000604448 511 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 MIR6867-201ENST00000610636 67 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AC024257.5-201ENST00000612739 531 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AL354976.1-201ENST00000613843 387 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 CYCSP41-201ENST00000616920 296 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AC138649.5-201ENST00000637456 137 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 AC097504.1-201ENST00000515103 2415 ntBASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BLOC1S4Q9NUP1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AL121657.1-201ENST00000327215 531 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 SNORD74.4-201ENST00000364129 80 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 RNU6-339P-201ENST00000384310 107 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 RPL31P1-201ENST00000398116 372 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AL024474.1-201ENST00000404655 591 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 TBCAP1-201ENST00000436520 327 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AC073587.1-201ENST00000447093 876 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AC022034.3-201ENST00000471393 478 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 SYPL1P1-201ENST00000473622 768 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 RPL29P14-201ENST00000495837 428 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 OR5H5P-201ENST00000503164 928 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 IGKV2D-36-201ENST00000518643 226 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AC087808.1-201ENST00000520501 361 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AC006518.1-201ENST00000541449 943 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 GTF2IP8-201ENST00000560687 584 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AL590392.1-201ENST00000604960 446 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AC005332.6-201ENST00000613178 446 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 AC090116.1-201ENST00000615679 446 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 MIR492-201ENST00000638676 116 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 MKKS-204ENST00000639674 192 ntBASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms