Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 FTH1P9-201ENST00000513251 355 ntBASIC3.89□□□□□ -1.79
DDX47Q9H0S4 HMGN1P15-201ENST00000513870 295 ntBASIC3.89□□□□□ -1.79
DDX47Q9H0S4 SNORA70.14-201ENST00000516205 110 ntBASIC3.89□□□□□ -1.79
DDX47Q9H0S4 MTND1P36-201ENST00000522384 936 ntBASIC3.89□□□□□ -1.79
DDX47Q9H0S4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 AC006518.2-201ENST00000542513 940 ntBASIC3.89□□□□□ -1.79
DDX47Q9H0S4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 BNIP3P19-201ENST00000605397 577 ntBASIC3.89□□□□□ -1.79
DDX47Q9H0S4 AL354760.1-201ENST00000608357 643 ntBASIC3.89□□□□□ -1.79
DDX47Q9H0S4 MLECP1-201ENST00000615893 709 ntBASIC3.89□□□□□ -1.79
DDX47Q9H0S4 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 BX649567.1-201ENST00000642071 1134 ntBASIC3.89□□□□□ -1.79
DDX47Q9H0S4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.89□□□□□ -1.79
DDX47Q9H0S4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 SGO1P1-201ENST00000603525 1447 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 RLIMP1-201ENST00000339626 1680 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 RPL32P3-201ENST00000359025 275 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 OR6C69P-201ENST00000394268 893 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 SOD2P1-201ENST00000396543 562 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 FABP12P1-201ENST00000401911 322 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 SNORA57.3-201ENST00000411095 141 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC009237.5-201ENST00000414271 501 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 RPS3AP9-201ENST00000417027 792 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 HMGB3P20-201ENST00000417997 600 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC009237.2-201ENST00000421358 284 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 NIPA2P1-201ENST00000426223 976 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 RPP40P1-201ENST00000426762 456 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC234064.1-201ENST00000436312 247 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 SEPT14P24-201ENST00000447236 180 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 NUTF2P3-201ENST00000448540 384 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 RN7SL385P-201ENST00000468873 276 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC015908.1-201ENST00000478739 476 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC110792.1-201ENST00000491826 472 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 NAMPTP2-201ENST00000505629 1115 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 RN7SKP122-201ENST00000515923 296 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC008011.1-201ENST00000545989 227 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC022069.1-201ENST00000582910 658 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 HSPE1P14-201ENST00000605812 302 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC005962.2-201ENST00000611427 652 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 RNVU1-4-201ENST00000612985 164 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC008759.3-201ENST00000613300 508 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 AC083809.1-201ENST00000615051 472 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 MIR6758-201ENST00000620653 63 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 MIR6810-201ENST00000622701 70 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 C2orf27A-204ENST00000623058 969 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 EXOC5P1-201ENST00000510543 1969 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.88□□□□□ -1.79
DDX47Q9H0S4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX47Q9H0S4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
DDX47Q9H0S4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
DDX47Q9H0S4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DDX47Q9H0S4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DDX47Q9H0S4 RNA5SP97-201ENST00000365006 84 ntBASIC3.87□□□□□ -1.79
DDX47Q9H0S4 RNU6-619P-201ENST00000365146 108 ntBASIC3.87□□□□□ -1.79
DDX47Q9H0S4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms