Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 FNDC3CP-201ENST00000420795 1155 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 RPS27AP7-201ENST00000422792 455 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 RPS27AP14-201ENST00000422868 454 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 RPS17P8-201ENST00000434525 335 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 RPL7P11-201ENST00000437586 658 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 RPS26P2-201ENST00000440331 348 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 HMGB3P9-201ENST00000441799 583 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC112498.1-201ENST00000444401 332 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 ST13P20-201ENST00000447996 1065 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC104073.1-201ENST00000451988 151 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC106872.3-201ENST00000495104 446 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC008953.1-201ENST00000497334 318 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC108941.1-201ENST00000502853 530 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC021678.1-201ENST00000505195 936 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 POU5F1P7-201ENST00000508759 541 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AF186190.1-201ENST00000517470 480 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 OR6C7P-201ENST00000547875 934 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 EDDM3DP-201ENST00000554692 434 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC084757.1-201ENST00000559987 490 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 IMMP1LP1-201ENST00000605170 488 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC090948.2-201ENST00000607363 564 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC010678.1-201ENST00000614118 713 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC025588.4-201ENST00000615802 908 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC009704.2-201ENST00000618739 483 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AL590240.3-201ENST00000621416 943 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 MTND4P4-201ENST00000439033 1366 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 GDI2P1-201ENST00000429312 1336 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AL356473.1-201ENST00000406203 1408 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AC103591.2-201ENST00000265259 766 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 RPL23AP57-201ENST00000332361 466 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 FGF7P2-201ENST00000332473 296 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 RNU4-75P-201ENST00000364621 146 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 Y_RNA.505-201ENST00000384489 102 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 MIR1178-201ENST00000408396 91 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 RPS7P13-201ENST00000413955 498 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 E2F6P2-201ENST00000420708 748 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 RPS27P18-201ENST00000431701 247 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 PRELID3BP10-201ENST00000431957 584 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 CDC27P1-201ENST00000445384 715 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 RPL23AP56-201ENST00000460778 453 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AC091564.1-201ENST00000464563 479 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 RPS4XP14-201ENST00000493072 781 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AC090453.1-201ENST00000495560 436 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 GAPDHP56-201ENST00000506031 988 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AC087477.6-201ENST00000559595 843 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AGGF1P4-201ENST00000568249 801 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AC090181.2-201ENST00000602975 672 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AC020910.3-201ENST00000603701 874 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AC103710.4-201ENST00000609301 899 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 SDR42E1P1-201ENST00000611327 477 ntBASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM54Q9BYV2 CYP3A51P-201ENST00000633513 256 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms