Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 NPM1P18-201ENST00000434232 732 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 ACTR3P2-201ENST00000439585 1257 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC096741.1-201ENST00000472250 846 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC023194.1-201ENST00000493084 308 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 EIF3KP3-201ENST00000514461 639 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 RNU6-1045P-201ENST00000516321 107 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 RN7SKP283-201ENST00000517197 270 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 MIR3671-201ENST00000580455 88 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 RN7SL356P-201ENST00000582228 248 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AL132765.2-201ENST00000610812 351 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC006504.8-201ENST00000621046 635 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AL158801.5-201ENST00000623123 465 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AL353796.1-201ENST00000561542 3241 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 OR11H5P-202ENST00000641612 1325 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC126755.2-208ENST00000327792 462 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC138969.1-213ENST00000331436 462 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 RN7SKP104-201ENST00000362605 328 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 Y_RNA.67-201ENST00000362870 100 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 RN7SKP145-201ENST00000363291 303 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 SNORD81.2-201ENST00000365153 76 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 DBIP1-201ENST00000401435 260 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC133104.1-201ENST00000429100 218 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 CBX1P1-201ENST00000440184 427 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 RPL17P49-201ENST00000443728 411 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 LINC02210-201ENST00000444561 288 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC119744.1-201ENST00000454746 1715 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 RN7SL188P-201ENST00000469842 285 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC092754.1-201ENST00000472975 479 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 RN7SL459P-201ENST00000481078 302 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 CR383656.1-201ENST00000484916 377 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC013356.1-201ENST00000489027 564 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC004980.4-201ENST00000513375 203 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AP003034.1-201ENST00000534621 422 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC090502.2-201ENST00000549267 280 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 SUB1P2-201ENST00000556401 297 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 HMGN2P47-201ENST00000559378 272 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC009117.1-201ENST00000563948 554 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC009237.17-201ENST00000618111 748 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 YWHAEP7-203ENST00000622054 312 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AL353662.3-201ENST00000625131 237 ntBASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SYNGAP1Q96PV0 ADAM24P-201ENST00000398655 2101 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms