Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC107393.1-201ENST00000512403 346 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 RNU6-1278P-201ENST00000516130 107 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 SCARNA5-201ENST00000516201 276 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 RNU6-346P-201ENST00000516288 111 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 AC022559.1-201ENST00000520905 205 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 CBX3P4-201ENST00000538909 354 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LRCH3Q96II8 AC006600.1-201ENST00000572529 153 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 RN7SL475P-201ENST00000583379 298 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 AL356274.1-201ENST00000617064 410 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 AL137058.3-201ENST00000624531 3099 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 AC055839.1-201ENST00000634467 498 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 UG0898H09-202ENST00000623646 7040 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
LRCH3Q96II8 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 IMMTP1-201ENST00000435590 2219 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
LRCH3Q96II8 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
LRCH3Q96II8 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LRCH3Q96II8 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.29
LRCH3Q96II8 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.96□□□□□ -1.29
LRCH3Q96II8 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
LRCH3Q96II8 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.96□□□□□ -1.29
LRCH3Q96II8 AC009902.3-201ENST00000606235 2172 ntBASIC6.96□□□□□ -1.29
LRCH3Q96II8 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LRCH3Q96II8 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
LRCH3Q96II8 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LRCH3Q96II8 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LRCH3Q96II8 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LRCH3Q96II8 AC016251.2-201ENST00000623393 3089 ntBASIC6.96□□□□□ -1.29
LRCH3Q96II8 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.96□□□□□ -1.29
LRCH3Q96II8 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LRCH3Q96II8 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LRCH3Q96II8 RNY3P11-201ENST00000364153 102 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 RNU4-50P-201ENST00000364361 141 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 Y_RNA.237-201ENST00000364439 102 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 RNY1P5-201ENST00000383890 115 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 SNORA51.11-201ENST00000384442 131 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 MIR19A-201ENST00000384878 82 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 MIR1203-201ENST00000408812 85 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 AC114491.1-201ENST00000416095 246 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 AL663061.1-201ENST00000416625 580 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 AL034379.1-201ENST00000423216 253 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 SRSF1P1-201ENST00000424058 520 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 GSTA6P-201ENST00000424144 582 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 BX323845.3-201ENST00000428215 527 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 AL360081.1-201ENST00000428299 555 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LRCH3Q96II8 AL158071.1-201ENST00000430315 461 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 RPS26P40-201ENST00000435209 294 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LRCH3Q96II8 AC068305.1-201ENST00000497406 726 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 SETP2-201ENST00000553886 926 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 SNORD39.2-201ENST00000579995 76 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 AC073410.2-201ENST00000603240 332 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 AP001823.1-201ENST00000604056 1003 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 AC145423.1-201ENST00000605712 336 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 AL159153.1-201ENST00000619688 317 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
LRCH3Q96II8 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
LRCH3Q96II8 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LRCH3Q96II8 SDAD1P2-201ENST00000441308 2028 ntBASIC6.96□□□□□ -1.3
LRCH3Q96II8 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LRCH3Q96II8 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LRCH3Q96II8 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LRCH3Q96II8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.96□□□□□ -1.3
LRCH3Q96II8 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LRCH3Q96II8 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LRCH3Q96II8 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LRCH3Q96II8 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LRCH3Q96II8 AC079753.1-201ENST00000623243 3868 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LRCH3Q96II8 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LRCH3Q96II8 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms