Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTP4Q96DX8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 AL133243.3-201ENST00000617415 3004 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTP4Q96DX8 LINC01355-201ENST00000566551 5444 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTP4Q96DX8 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 AL121657.1-201ENST00000327215 531 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTP4Q96DX8 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 RNU1-132P-201ENST00000364300 164 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RTP4Q96DX8 Y_RNA.408-201ENST00000383987 102 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 RPS26P8-201ENST00000393490 348 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 SNORA3C-201ENST00000408792 125 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 RNA5SP39-201ENST00000411245 120 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 JKAMPP1-201ENST00000413804 919 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC098592.1-201ENST00000419352 333 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RTP4Q96DX8 MTCO1P54-201ENST00000430139 712 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 MTCO3P21-201ENST00000430791 643 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC011742.1-201ENST00000431448 434 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 GTF2IP7-202ENST00000436677 309 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 MTND3P1-201ENST00000441336 220 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC114755.5-201ENST00000447760 831 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 NPM1P39-201ENST00000449818 867 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC097262.1-201ENST00000452559 548 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 MTCO3P16-201ENST00000454456 754 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AL109741.2-201ENST00000455561 343 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 CCDC75P1-201ENST00000469247 791 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 SYPL1P1-201ENST00000473622 768 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 LINC00888-204ENST00000487386 421 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 RPS26P15-201ENST00000488067 348 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC116353.3-201ENST00000511215 249 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 KCTD9P2-201ENST00000512203 1013 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 IGKV2-38-201ENST00000517443 247 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC105233.3-201ENST00000531125 744 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC007115.1-201ENST00000546853 234 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC023161.2-201ENST00000551218 780 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC025884.1-201ENST00000556034 378 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 SULT1C2P2-201ENST00000562517 294 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 MIR3915-201ENST00000578518 97 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 HULC.1-201ENST00000612720 240 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC233309.1-201ENST00000619522 751 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 MIR4727-201ENST00000622232 55 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC093775.1-201ENST00000624154 1868 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 MIR3653-201ENST00000625572 110 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 AC087821.2-201ENST00000637086 450 ntBASIC4.25□□□□□ -1.73
RTP4Q96DX8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTP4Q96DX8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTP4Q96DX8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTP4Q96DX8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTP4Q96DX8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RTP4Q96DX8 MARK2P15-201ENST00000432204 2186 ntBASIC4.24□□□□□ -1.73
RTP4Q96DX8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.24□□□□□ -1.73
RTP4Q96DX8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RTP4Q96DX8 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RTP4Q96DX8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RTP4Q96DX8 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RTP4Q96DX8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RTP4Q96DX8 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RTP4Q96DX8 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RTP4Q96DX8 RNU6-560P-201ENST00000364007 108 ntBASIC4.24□□□□□ -1.73
RTP4Q96DX8 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RTP4Q96DX8 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.24□□□□□ -1.73
RTP4Q96DX8 AC092745.2-202ENST00000411880 369 ntBASIC4.24□□□□□ -1.73
RTP4Q96DX8 PGBD4P8-201ENST00000412993 562 ntBASIC4.24□□□□□ -1.73
RTP4Q96DX8 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.24□□□□□ -1.73
RTP4Q96DX8 PAICSP7-201ENST00000419829 962 ntBASIC4.24□□□□□ -1.73
RTP4Q96DX8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RTP4Q96DX8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.24□□□□□ -1.73
RTP4Q96DX8 ATP5F1P1-201ENST00000433775 569 ntBASIC4.24□□□□□ -1.73
RTP4Q96DX8 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.24□□□□□ -1.73
RTP4Q96DX8 YWHAZP7-201ENST00000436906 631 ntBASIC4.24□□□□□ -1.73
RTP4Q96DX8 MTCYBP3-201ENST00000445588 1137 ntBASIC4.24□□□□□ -1.73
RTP4Q96DX8 AL360221.1-201ENST00000445989 335 ntBASIC4.24□□□□□ -1.73
RTP4Q96DX8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.24□□□□□ -1.73
RTP4Q96DX8 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.24□□□□□ -1.73
RTP4Q96DX8 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RTP4Q96DX8 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms