Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.08□□□□□ -1.6
HPS3Q969F9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.08□□□□□ -1.6
HPS3Q969F9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HPS3Q969F9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HPS3Q969F9 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
HPS3Q969F9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HPS3Q969F9 KARSP3-201ENST00000571212 1504 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HPS3Q969F9 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HPS3Q969F9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HPS3Q969F9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HPS3Q969F9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HPS3Q969F9 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HPS3Q969F9 DDX43P2-201ENST00000604753 1354 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HPS3Q969F9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HPS3Q969F9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.07□□□□□ -1.6
HPS3Q969F9 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HPS3Q969F9 RNU6-462P-201ENST00000362659 105 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 Y_RNA.318-201ENST00000365131 97 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HPS3Q969F9 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HPS3Q969F9 RPS24P12-201ENST00000402084 394 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 AL049697.2-201ENST00000403708 294 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.07□□□□□ -1.6
HPS3Q969F9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.07□□□□□ -1.6
HPS3Q969F9 AC244035.1-201ENST00000430042 390 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.07□□□□□ -1.6
HPS3Q969F9 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.07□□□□□ -1.6
HPS3Q969F9 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.07□□□□□ -1.6
HPS3Q969F9 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.07□□□□□ -1.6
HPS3Q969F9 RPS20P21-201ENST00000466859 343 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 RN7SL354P-201ENST00000469282 294 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 AC090013.1-201ENST00000485147 480 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 FAM172BP-201ENST00000487497 1089 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 AC080014.1-201ENST00000496877 1201 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 AC090071.1-201ENST00000507713 644 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 MTCYBP37-201ENST00000510642 1133 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.07□□□□□ -1.6
HPS3Q969F9 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.07□□□□□ -1.6
HPS3Q969F9 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.07□□□□□ -1.6
HPS3Q969F9 AC084757.1-201ENST00000559987 490 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.07□□□□□ -1.6
HPS3Q969F9 MIR5186-201ENST00000577504 120 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 RN7SL52P-201ENST00000584271 284 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.07□□□□□ -1.6
HPS3Q969F9 ELOCP28-201ENST00000590044 317 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.07□□□□□ -1.6
HPS3Q969F9 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.07□□□□□ -1.6
HPS3Q969F9 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.07□□□□□ -1.6
HPS3Q969F9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.07□□□□□ -1.6
HPS3Q969F9 AL451064.1-201ENST00000607718 471 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.07□□□□□ -1.6
HPS3Q969F9 MIR7844-201ENST00000616161 122 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 RN7SL722P-201ENST00000617780 284 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 RN7SL565P-201ENST00000618246 284 ntBASIC5.07□□□□□ -1.6
HPS3Q969F9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.07□□□□□ -1.6
HPS3Q969F9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HPS3Q969F9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HPS3Q969F9 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HPS3Q969F9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HPS3Q969F9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HPS3Q969F9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HPS3Q969F9 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.07□□□□□ -1.6
HPS3Q969F9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HPS3Q969F9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HPS3Q969F9 AP000542.2-201ENST00000623199 6179 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.06□□□□□ -1.6
HPS3Q969F9 MAPK10-286ENST00000641208 8747 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HPS3Q969F9 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HPS3Q969F9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
HPS3Q969F9 NEAT1-202ENST00000501122 22743 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HPS3Q969F9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HPS3Q969F9 AL122126.1-201ENST00000546905 1318 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.06□□□□□ -1.6
HPS3Q969F9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HPS3Q969F9 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HPS3Q969F9 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HPS3Q969F9 RNU6-374P-201ENST00000364146 108 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 SNORA51.6-201ENST00000384151 125 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 RNU6-1226P-201ENST00000384317 107 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 MIR192-201ENST00000384915 110 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 MIR141-201ENST00000384975 95 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.06□□□□□ -1.6
HPS3Q969F9 RNU2-21P-201ENST00000410368 188 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 OR8G2P-201ENST00000412796 908 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 RPL26P29-201ENST00000415623 438 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.06□□□□□ -1.6
HPS3Q969F9 VN1R108P-201ENST00000431580 830 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HPS3Q969F9 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.06□□□□□ -1.6
HPS3Q969F9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.06□□□□□ -1.6
HPS3Q969F9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.06□□□□□ -1.6
HPS3Q969F9 MTCO2P7-201ENST00000446518 666 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.06□□□□□ -1.6
HPS3Q969F9 ARPC3P2-201ENST00000457786 533 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 RPL5P30-201ENST00000465511 891 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms