Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ZNF705CP-201ENST00000530515 889 ntBASIC5.54□□□□□ -1.52
DDX1Q92499 CYCSP28-201ENST00000534284 321 ntBASIC5.54□□□□□ -1.52
DDX1Q92499 GTF2IP22-201ENST00000554443 182 ntBASIC5.54□□□□□ -1.52
DDX1Q92499 AC079075.1-201ENST00000559543 878 ntBASIC5.54□□□□□ -1.52
DDX1Q92499 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DDX1Q92499 AC018552.3-201ENST00000567416 561 ntBASIC5.54□□□□□ -1.52
DDX1Q92499 MIR4504-201ENST00000577413 92 ntBASIC5.54□□□□□ -1.52
DDX1Q92499 UBE2V2P2-201ENST00000587677 504 ntBASIC5.54□□□□□ -1.52
DDX1Q92499 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.54□□□□□ -1.52
DDX1Q92499 AP001005.3-201ENST00000622049 129 ntBASIC5.54□□□□□ -1.52
DDX1Q92499 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DDX1Q92499 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
DDX1Q92499 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DDX1Q92499 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DDX1Q92499 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DDX1Q92499 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DDX1Q92499 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
DDX1Q92499 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
DDX1Q92499 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DDX1Q92499 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
DDX1Q92499 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 MAPK10-338ENST00000641647 3362 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
DDX1Q92499 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
DDX1Q92499 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX1Q92499 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX1Q92499 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX1Q92499 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX1Q92499 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
DDX1Q92499 AL031985.3-201ENST00000565390 2449 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX1Q92499 RNU6-433P-201ENST00000363216 104 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX1Q92499 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
DDX1Q92499 CYB5AP4-201ENST00000396692 399 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 AL356057.2-201ENST00000403318 432 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.53□□□□□ -1.52
DDX1Q92499 AL023807.1-201ENST00000407932 359 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 U3.36-201ENST00000408418 213 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.53□□□□□ -1.52
DDX1Q92499 HMGB1P11-201ENST00000413899 637 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.53□□□□□ -1.52
DDX1Q92499 AL512649.1-201ENST00000428997 581 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.53□□□□□ -1.52
DDX1Q92499 AL365184.2-201ENST00000431139 435 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 BTF3P10-201ENST00000433415 495 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 AL161722.2-201ENST00000434731 981 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 AC105402.2-201ENST00000438503 358 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 GDI2P2-201ENST00000445131 608 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 RPS3AP17-201ENST00000472594 777 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 AL049874.2-201ENST00000492636 288 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 NIFKP7-201ENST00000503365 834 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 AC097173.1-201ENST00000505862 819 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
DDX1Q92499 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.53□□□□□ -1.52
DDX1Q92499 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
DDX1Q92499 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.53□□□□□ -1.52
DDX1Q92499 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.53□□□□□ -1.52
DDX1Q92499 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.53□□□□□ -1.52
DDX1Q92499 MIR5186-201ENST00000577504 120 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 MIR4637-201ENST00000582405 84 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.53□□□□□ -1.52
DDX1Q92499 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.53□□□□□ -1.52
DDX1Q92499 AC087283.1-201ENST00000604029 1074 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 MIR6864-201ENST00000617935 70 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 AC068722.2-201ENST00000618734 544 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 OR4G11P-202ENST00000642116 1414 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX1Q92499 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
DDX1Q92499 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
DDX1Q92499 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX1Q92499 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX1Q92499 HSPA8P14-201ENST00000552265 1805 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 AC073136.1-201ENST00000449426 2884 ntBASIC5.53□□□□□ -1.52
DDX1Q92499 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX1Q92499 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.52□□□□□ -1.53
DDX1Q92499 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
DDX1Q92499 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.52□□□□□ -1.53
DDX1Q92499 AC093849.1-201ENST00000563631 2209 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.52□□□□□ -1.53
DDX1Q92499 PABPC1P9-201ENST00000426076 1612 ntBASIC5.52□□□□□ -1.53
DDX1Q92499 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
DDX1Q92499 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.52□□□□□ -1.53
DDX1Q92499 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
DDX1Q92499 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
DDX1Q92499 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms