Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS8Q8N3P4 RNU6-851P-201ENST00000384565 107 ntBASIC4.55□□□□□ -1.68
VPS8Q8N3P4 RPL5P18-201ENST00000406671 891 ntBASIC4.55□□□□□ -1.68
VPS8Q8N3P4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS8Q8N3P4 AC236972.1-201ENST00000433225 199 ntBASIC4.55□□□□□ -1.68
VPS8Q8N3P4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS8Q8N3P4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS8Q8N3P4 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS8Q8N3P4 AL358913.1-201ENST00000554342 121 ntBASIC4.55□□□□□ -1.68
VPS8Q8N3P4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS8Q8N3P4 MIR4298-201ENST00000584380 73 ntBASIC4.55□□□□□ -1.68
VPS8Q8N3P4 AC078899.5-201ENST00000612475 178 ntBASIC4.55□□□□□ -1.68
VPS8Q8N3P4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
VPS8Q8N3P4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS8Q8N3P4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS8Q8N3P4 RPL21P3-201ENST00000395517 478 ntBASIC4.55□□□□□ -1.68
VPS8Q8N3P4 AC146507.2-201ENST00000460608 476 ntBASIC4.55□□□□□ -1.68
VPS8Q8N3P4 RPL23AP14-201ENST00000468281 468 ntBASIC4.55□□□□□ -1.68
VPS8Q8N3P4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS8Q8N3P4 RN7SKP43-201ENST00000516173 320 ntBASIC4.55□□□□□ -1.68
VPS8Q8N3P4 AC024224.1-201ENST00000538284 609 ntBASIC4.55□□□□□ -1.68
VPS8Q8N3P4 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
VPS8Q8N3P4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS8Q8N3P4 AC006840.1-201ENST00000623069 542 ntBASIC4.55□□□□□ -1.68
VPS8Q8N3P4 MIR7153-201ENST00000637758 57 ntBASIC4.55□□□□□ -1.68
VPS8Q8N3P4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.54□□□□□ -1.68
VPS8Q8N3P4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 SNORA70E-201ENST00000384492 135 ntBASIC4.54□□□□□ -1.68
VPS8Q8N3P4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 RNF19BPX-201ENST00000426224 625 ntBASIC4.54□□□□□ -1.68
VPS8Q8N3P4 RPL23AP4-201ENST00000427757 463 ntBASIC4.54□□□□□ -1.68
VPS8Q8N3P4 RPS27P29-201ENST00000463110 252 ntBASIC4.54□□□□□ -1.68
VPS8Q8N3P4 UBE2DNL-203ENST00000474922 222 ntBASIC4.54□□□□□ -1.68
VPS8Q8N3P4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 METTL15P1-201ENST00000481421 1045 ntBASIC4.54□□□□□ -1.68
VPS8Q8N3P4 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 AC107016.2-201ENST00000547968 190 ntBASIC4.54□□□□□ -1.68
VPS8Q8N3P4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS8Q8N3P4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS8Q8N3P4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS8Q8N3P4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS8Q8N3P4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS8Q8N3P4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS8Q8N3P4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS8Q8N3P4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS8Q8N3P4 NPM1P24-201ENST00000428039 894 ntBASIC4.53□□□□□ -1.68
VPS8Q8N3P4 AC000041.1-201ENST00000439655 175 ntBASIC4.53□□□□□ -1.68
VPS8Q8N3P4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS8Q8N3P4 HMGB3P8-201ENST00000449709 577 ntBASIC4.53□□□□□ -1.68
VPS8Q8N3P4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS8Q8N3P4 AC243756.2-201ENST00000618406 463 ntBASIC4.53□□□□□ -1.68
VPS8Q8N3P4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
VPS8Q8N3P4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 RPL29P29-201ENST00000448725 423 ntBASIC4.52□□□□□ -1.69
VPS8Q8N3P4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 AC138409.2-202ENST00000507274 458 ntBASIC4.52□□□□□ -1.69
VPS8Q8N3P4 RN7SKP132-201ENST00000516001 208 ntBASIC4.52□□□□□ -1.69
VPS8Q8N3P4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 AL353743.4-201ENST00000422653 1547 ntBASIC4.52□□□□□ -1.69
VPS8Q8N3P4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS8Q8N3P4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
VPS8Q8N3P4 MIR148B-201ENST00000362252 99 ntBASIC4.51□□□□□ -1.69
VPS8Q8N3P4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS8Q8N3P4 BOLA3P4-201ENST00000418151 400 ntBASIC4.51□□□□□ -1.69
VPS8Q8N3P4 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.51□□□□□ -1.69
VPS8Q8N3P4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
VPS8Q8N3P4 AC118282.1-201ENST00000506408 765 ntBASIC4.51□□□□□ -1.69
VPS8Q8N3P4 AC117522.3-201ENST00000507974 584 ntBASIC4.51□□□□□ -1.69
VPS8Q8N3P4 AC119751.1-201ENST00000513357 765 ntBASIC4.51□□□□□ -1.69
VPS8Q8N3P4 MTCO3P22-201ENST00000603219 784 ntBASIC4.51□□□□□ -1.69
VPS8Q8N3P4 ATP1B3P1-201ENST00000605365 821 ntBASIC4.51□□□□□ -1.69
VPS8Q8N3P4 AC245100.7-201ENST00000609678 442 ntBASIC4.51□□□□□ -1.69
VPS8Q8N3P4 AC022960.2-201ENST00000616300 666 ntBASIC4.51□□□□□ -1.69
VPS8Q8N3P4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS8Q8N3P4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS8Q8N3P4 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS8Q8N3P4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS8Q8N3P4 OR52B1P-201ENST00000316506 909 ntBASIC4.5□□□□□ -1.69
VPS8Q8N3P4 RNU6-729P-201ENST00000384399 107 ntBASIC4.5□□□□□ -1.69
VPS8Q8N3P4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms