Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.34□□□□□ -1.56
SYNE4Q8N205 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
SYNE4Q8N205 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SYNE4Q8N205 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SYNE4Q8N205 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SYNE4Q8N205 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SYNE4Q8N205 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SYNE4Q8N205 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SYNE4Q8N205 AL672167.1-206ENST00000356293 943 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 Y_RNA.6-201ENST00000362350 114 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 RNU6-543P-201ENST00000362576 108 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 RNA5SP307-201ENST00000362863 116 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 RNU6-666P-201ENST00000363499 107 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 MIR200C-201ENST00000384980 68 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 AL079342.2-201ENST00000403367 482 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 AL161449.1-201ENST00000414531 1199 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SYNE4Q8N205 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 snoU13.24-201ENST00000458998 104 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC091564.1-201ENST00000464563 479 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC090602.1-201ENST00000469695 252 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 AF213884.1-201ENST00000488102 463 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 DSTNP2-201ENST00000504533 515 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 snoZ278.1-201ENST00000517059 112 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC138832.1-201ENST00000522871 556 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC012435.1-202ENST00000568772 240 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 ISCA1P3-201ENST00000577104 373 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 MIR5708-201ENST00000579723 85 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC087683.1-201ENST00000591187 441 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC126118.1-201ENST00000607744 628 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC008498.1-201ENST00000613012 531 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC010678.1-201ENST00000614118 713 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 MIR8069-1-201ENST00000616627 86 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC243756.2-201ENST00000618406 463 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 U6.42-201ENST00000618440 107 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 MIR8069-2-201ENST00000621412 86 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC039056.2-201ENST00000622261 511 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC019226.1-201ENST00000625666 515 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 AC000367.1-201ENST00000452711 1766 ntBASIC5.33□□□□□ -1.56
SYNE4Q8N205 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SYNE4Q8N205 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SYNE4Q8N205 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
SYNE4Q8N205 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.33□□□□□ -1.56
SYNE4Q8N205 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SYNE4Q8N205 RNU4-21P-201ENST00000362802 126 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 SNORD66.1-201ENST00000391230 76 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 MIR921-201ENST00000401133 56 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 HSPD1P16-201ENST00000402302 394 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC062016.2-201ENST00000420950 676 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 RPL36AP10-201ENST00000421785 322 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 OR8F1P-201ENST00000425243 930 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 YME1L1P1-201ENST00000429435 297 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 YWHAEP5-201ENST00000431545 765 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 AL353093.1-201ENST00000441292 436 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 PRSS3P4-201ENST00000453323 162 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 RNU6-956P-201ENST00000458868 103 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC108751.2-201ENST00000469993 231 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 RPL23AP2-201ENST00000471227 466 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 NCOR1P1-202ENST00000486162 291 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 MTAPP1-201ENST00000489154 819 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AC008885.2-201ENST00000509506 930 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 FTH1P21-201ENST00000512179 511 ntBASIC5.32□□□□□ -1.56
SYNE4Q8N205 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms