Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC025181.1-201ENST00000477507 416 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 RPL21P103-201ENST00000479921 488 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 OR52A4P-202ENST00000481634 799 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AC005726.1-201ENST00000494679 427 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AC026784.1-201ENST00000507986 352 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 MTCO1P49-201ENST00000523429 802 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AL121594.4-201ENST00000556211 1196 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AC006130.2-201ENST00000586202 326 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 LLPHP1-201ENST00000603571 367 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 SUMO2P14-201ENST00000604488 293 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AC099778.2-201ENST00000610904 211 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AL450489.1-201ENST00000612071 468 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AL356863.1-201ENST00000623378 1080 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AC112200.1-201ENST00000625015 234 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 SNORD115-48-201ENST00000364764 76 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 HMGB1P10-201ENST00000395823 563 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 RPL17P36-201ENST00000420302 549 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 ARL2BPP3-201ENST00000421226 480 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 MORF4L1P7-201ENST00000426038 703 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AC018644.1-201ENST00000429934 551 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 RPL21P133-201ENST00000443666 476 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AP000563.1-201ENST00000490865 758 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AC078918.1-201ENST00000498515 228 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 SNORA70.19-201ENST00000516717 90 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 TRMT10BP1-201ENST00000519377 943 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AP002812.4-201ENST00000532139 286 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 CKS1BP1-201ENST00000555221 240 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 ZNF92P3-201ENST00000596594 954 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AC105429.2-201ENST00000610567 517 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 RNVU1-4-201ENST00000612985 164 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AC005156.1-201ENST00000613371 573 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 CR392039.5-201ENST00000623201 510 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AL118508.4-201ENST00000624142 1176 ntBASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC65Q8IXS2 AL672296.1-201ENST00000427780 2158 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 GTF2H2B-203ENST00000508065 1432 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 RNU4-31P-201ENST00000384211 141 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 AP000567.1-201ENST00000406413 156 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 RN7SKP285-201ENST00000410137 318 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 SYF2P2-201ENST00000417620 583 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 MTCO3P4-201ENST00000419236 787 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 RPS24P8-201ENST00000431490 402 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 KCTD10P1-201ENST00000434203 625 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 PPIAP3-201ENST00000450588 505 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 RN7SL542P-201ENST00000467147 294 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 AC020898.1-201ENST00000474167 787 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 RN7SKP82-201ENST00000516786 223 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 AC023632.4-201ENST00000517783 191 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 AC004923.2-201ENST00000529649 369 ntBASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC65Q8IXS2 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms