Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RNU4-60P-201ENST00000517239 135 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 GTF2IP22-201ENST00000554443 182 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AC023158.1-201ENST00000561632 1025 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AC245128.3-201ENST00000594721 748 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AC006557.5-201ENST00000603126 811 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 AC017071.1-201ENST00000564407 2204 ntBASIC3.54□□□□□ -1.84
CDKL3Q8IVW4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 RNU6-317P-201ENST00000384031 107 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 RNU4-31P-201ENST00000384211 141 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC105402.1-201ENST00000413336 545 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC126124.2-201ENST00000413542 321 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 Z99755.1-201ENST00000414048 380 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AL512504.1-201ENST00000415494 778 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 MTCO1P57-201ENST00000432182 261 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 MED6P1-201ENST00000439659 713 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 RSL24D1P2-201ENST00000445584 366 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC097262.1-201ENST00000452559 548 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 U3.44-201ENST00000458938 192 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC010401.1-201ENST00000463867 348 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC087312.1-201ENST00000471411 480 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC110768.1-201ENST00000509222 400 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC110792.2-201ENST00000510278 224 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC104619.4-201ENST00000510773 249 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 MIR2276-201ENST00000516886 89 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AP001636.2-201ENST00000525517 696 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC034105.4-201ENST00000568304 277 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC112230.1-201ENST00000604342 547 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC084036.1-201ENST00000609190 508 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AL392048.1-201ENST00000613946 534 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 MTND5P3-201ENST00000438536 1800 ntBASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CDKL3Q8IVW4 AC005183.1-201ENST00000603687 1979 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AC007256.1-201ENST00000392253 2765 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AC092326.2-201ENST00000624772 1561 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AIMP1P1-201ENST00000418670 937 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 BX679664.1-201ENST00000434429 253 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 RRM2P4-201ENST00000441721 562 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AC245517.2-201ENST00000442890 346 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AC044797.1-201ENST00000445744 679 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 SLC31A1P1-201ENST00000451221 567 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AC092754.2-201ENST00000463506 460 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 FABP5P12-201ENST00000515543 389 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 RNU1-95P-201ENST00000516357 160 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 RNU1-128P-201ENST00000516704 160 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 AC103843.2-201ENST00000530523 682 ntBASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.52□□□□□ -1.85
CDKL3Q8IVW4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 239.5 ms