Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.41□□□□□ -1.86
RAB43Q86YS6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.41□□□□□ -1.86
RAB43Q86YS6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.41□□□□□ -1.86
RAB43Q86YS6 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RAB43Q86YS6 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.41□□□□□ -1.86
RAB43Q86YS6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.41□□□□□ -1.86
RAB43Q86YS6 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.41□□□□□ -1.86
RAB43Q86YS6 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.41□□□□□ -1.86
RAB43Q86YS6 AC110792.4-201ENST00000609843 298 ntBASIC3.41□□□□□ -1.86
RAB43Q86YS6 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.41□□□□□ -1.86
RAB43Q86YS6 AC079684.1-201ENST00000621405 437 ntBASIC3.41□□□□□ -1.86
RAB43Q86YS6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RAB43Q86YS6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RAB43Q86YS6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RAB43Q86YS6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RAB43Q86YS6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
RAB43Q86YS6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.4□□□□□ -1.86
RAB43Q86YS6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RAB43Q86YS6 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RAB43Q86YS6 RNU6-525P-201ENST00000363685 104 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 SNORA27.3-201ENST00000364937 134 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RAB43Q86YS6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 SOD2P1-201ENST00000396543 562 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 EI24P2-201ENST00000397776 1076 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 AL590290.1-201ENST00000405336 380 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 Z86062.1-201ENST00000406773 777 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC010385.1-201ENST00000412374 256 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC004022.2-201ENST00000413824 193 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 HMGB3P20-201ENST00000417997 600 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 RPS12P23-201ENST00000419579 400 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 BX842559.1-201ENST00000419615 532 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC245054.1-201ENST00000420944 258 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 AP000907.1-201ENST00000428428 510 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 PPIAP3-201ENST00000450588 505 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 RPS4XP22-201ENST00000480755 780 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 AL358832.1-201ENST00000497800 389 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 MTATP6P22-201ENST00000507369 598 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 GTF2H2B-203ENST00000508065 1432 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 RN7SKP13-201ENST00000515933 244 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC093331.1-201ENST00000521474 169 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC005412.1-201ENST00000580812 1049 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RAB43Q86YS6 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RAB43Q86YS6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RAB43Q86YS6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RAB43Q86YS6 ZNF542P-204ENST00000482727 1305 ntBASIC3.4□□□□□ -1.87
RAB43Q86YS6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RAB43Q86YS6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 RAD1P1-201ENST00000231383 813 ntBASIC3.39□□□□□ -1.87
RAB43Q86YS6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RAB43Q86YS6 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RAB43Q86YS6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 MOB1AP1-201ENST00000430903 535 ntBASIC3.39□□□□□ -1.87
RAB43Q86YS6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RAB43Q86YS6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RAB43Q86YS6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 RPL23AP44-201ENST00000482216 473 ntBASIC3.39□□□□□ -1.87
RAB43Q86YS6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.39□□□□□ -1.87
RAB43Q86YS6 IGKV2-36-201ENST00000519999 223 ntBASIC3.39□□□□□ -1.87
RAB43Q86YS6 HMGB1P46-201ENST00000520062 610 ntBASIC3.39□□□□□ -1.87
RAB43Q86YS6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 AC008011.1-201ENST00000545989 227 ntBASIC3.39□□□□□ -1.87
RAB43Q86YS6 AC025260.1-201ENST00000548858 430 ntBASIC3.39□□□□□ -1.87
RAB43Q86YS6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.39□□□□□ -1.87
RAB43Q86YS6 AL121594.4-201ENST00000556211 1196 ntBASIC3.39□□□□□ -1.87
RAB43Q86YS6 TGIF1P1-201ENST00000558095 802 ntBASIC3.39□□□□□ -1.87
RAB43Q86YS6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms