Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RPL23AP89-201ENST00000439324 255 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 HMGB3P6-201ENST00000444896 598 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 MTCO3P2-201ENST00000457365 171 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC084024.2-201ENST00000503480 791 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 RNA5SP315-201ENST00000516340 116 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 RNA5SP312-201ENST00000517068 116 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 IGKV2D-36-201ENST00000518643 226 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC113368.1-201ENST00000603736 382 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 HMGN2P28-201ENST00000606102 262 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC024060.1-201ENST00000607052 494 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC009237.15-201ENST00000610252 501 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 FAM27D1-201ENST00000612308 341 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC233309.1-201ENST00000619522 751 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AC026634.1-201ENST00000634369 198 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 IQCB2P-201ENST00000401788 1633 ntBASIC4.3□□□□□ -1.72
PRPF39Q86UA1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRPF39Q86UA1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 SPRR2C-201ENST00000290702 219 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 RNU1-13P-201ENST00000384499 162 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 RN7SKP182-201ENST00000410772 298 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 RNA5SP306-201ENST00000411087 107 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 VN1R51P-201ENST00000411675 945 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AL133384.1-201ENST00000412744 351 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 BTF3P10-201ENST00000433415 495 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 KCTD10P1-201ENST00000434203 625 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 OR4C10P-201ENST00000434991 931 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AC093155.1-201ENST00000440164 826 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AL358794.1-201ENST00000445689 381 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AC007537.2-201ENST00000472093 511 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 RPS26P15-201ENST00000488067 348 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AC017037.1-201ENST00000508460 471 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 RN7SKP116-201ENST00000516902 319 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 SNORA48.10-201ENST00000516965 160 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AP000790.1-201ENST00000528891 737 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 OR8R1P-201ENST00000543943 764 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 MTCYBP23-201ENST00000558717 1102 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AC093227.2-201ENST00000589357 285 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AL161729.3-201ENST00000603533 673 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 AC004943.3-201ENST00000624116 600 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 OR1S1-201ENST00000624470 978 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 RNA5SP196-201ENST00000625967 102 ntBASIC4.29□□□□□ -1.72
PRPF39Q86UA1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PRPF39Q86UA1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 AL359893.1-201ENST00000447628 1580 ntBASIC4.28□□□□□ -1.72
PRPF39Q86UA1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF39Q86UA1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms