Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC021749.1-201ENST00000604322 607 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 Z98200.1-201ENST00000607298 470 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AL354760.1-201ENST00000608357 643 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AP001002.2-201ENST00000625137 386 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 AC017104.4-201ENST00000636283 1592 ntBASIC4.02□□□□□ -1.77
NUP54Q7Z3B4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AP000568.1-201ENST00000282964 442 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 RNU1-15P-201ENST00000353977 144 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 RNU6-582P-201ENST00000362989 107 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 RNA5SP509-201ENST00000364577 119 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 MTCO3P31-201ENST00000405526 789 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AL138880.1-201ENST00000405824 642 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 RN7SKP167-201ENST00000411047 285 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AC011933.1-201ENST00000413334 321 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AL513175.2-201ENST00000422071 443 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AL513174.1-201ENST00000423182 629 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AC093698.1-201ENST00000423843 571 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 MTCO2P17-201ENST00000424336 677 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 RPP40P1-201ENST00000426762 456 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 NANOGP2-201ENST00000435391 727 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 HMGB1P12-201ENST00000438594 598 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AL512326.1-201ENST00000443050 721 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 VN1R25P-201ENST00000443385 738 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AC239367.2-201ENST00000447309 705 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AL162151.2-201ENST00000448875 158 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 FABP3P2-201ENST00000453169 399 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AC116533.1-201ENST00000459748 321 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 SNRPGP3-201ENST00000469405 227 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 CEACAMP10-202ENST00000495431 496 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 RNU6-885P-201ENST00000516607 104 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AP004371.1-201ENST00000525240 214 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 MTND1P24-201ENST00000552175 861 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AL160290.3-201ENST00000604869 165 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AC009974.1-201ENST00000608881 455 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AL445423.1-201ENST00000609941 536 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AL355816.2-201ENST00000610049 647 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AL021997.2-201ENST00000615674 271 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AC140479.6-201ENST00000633535 357 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AF127577.6-201ENST00000623352 2191 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AC068254.2-201ENST00000623938 3577 ntBASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.01□□□□□ -1.77
NUP54Q7Z3B4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
NUP54Q7Z3B4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 RNU6-374P-201ENST00000364146 108 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 RNU6-115P-201ENST00000364310 107 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
NUP54Q7Z3B4 AL121978.1-201ENST00000402778 359 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 Y_RNA.625-201ENST00000411256 107 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 RNU2-71P-201ENST00000411395 189 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 AL356320.2-201ENST00000417263 507 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 IFNNP1-201ENST00000429219 553 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4□□□□□ -1.77
NUP54Q7Z3B4 AC092393.1-201ENST00000439625 742 ntBASIC4□□□□□ -1.77
NUP54Q7Z3B4 CBX1P1-201ENST00000440184 427 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms