Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AC087763.1-201ENST00000603391 286 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 BCRP9-201ENST00000605312 388 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AL133173.2-201ENST00000614270 90 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 RPSAP73-201ENST00000614820 330 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF43Q68DV7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF43Q68DV7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 MFSD8-219ENST00000641228 2559 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 LINC02019-201ENST00000608605 2060 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF43Q68DV7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF43Q68DV7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF43Q68DV7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF43Q68DV7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF43Q68DV7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC092376.2-201ENST00000622621 4116 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF43Q68DV7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF43Q68DV7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF43Q68DV7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 GTF2IP4-201ENST00000453092 2054 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 NACAP2-201ENST00000318548 624 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 RPL7P26-201ENST00000333817 754 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 RNU6-777P-201ENST00000364265 104 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 RN7SKP6-201ENST00000364795 319 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RNF43Q68DV7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 Y_RNA.395-201ENST00000383945 109 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 RNU6-456P-201ENST00000384493 107 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 MIR130A-201ENST00000385274 89 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 AL645927.1-201ENST00000396783 406 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 GPS2P1-201ENST00000411761 986 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 OR6E1P-201ENST00000414424 923 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC114482.1-201ENST00000418010 247 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 CACYBPP1-201ENST00000438592 684 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 AL772161.1-201ENST00000439130 476 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 BNIP3P2-201ENST00000441221 577 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 RPL7P59-201ENST00000447700 943 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 MTCO1P27-201ENST00000448269 226 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC091685.2-201ENST00000454924 864 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC011225.1-201ENST00000457751 369 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 TRBV8-2-201ENST00000475637 270 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 AL135752.1-201ENST00000479477 471 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC104687.1-201ENST00000485829 412 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC026801.2-201ENST00000515352 425 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 MTCO2P24-201ENST00000515611 426 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 SNORA40.12-201ENST00000516329 111 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 RNA5SP230-201ENST00000517039 122 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 RNU6-1137P-201ENST00000517073 99 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 RNU6-1314P-201ENST00000517139 104 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 FKBP1AP1-201ENST00000594588 318 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 NANOGP3-201ENST00000605855 286 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC008966.2-201ENST00000606157 453 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 AP004247.3-201ENST00000608682 624 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC092807.2-201ENST00000609367 243 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.88□□□□□ -1.47
RNF43Q68DV7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF43Q68DV7 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF43Q68DV7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF43Q68DV7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF43Q68DV7 PABPC1P6-201ENST00000445594 1829 ntBASIC5.88□□□□□ -1.47
RNF43Q68DV7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF43Q68DV7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RNF43Q68DV7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RNF43Q68DV7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RNF43Q68DV7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF43Q68DV7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 RNA5SP507-201ENST00000363603 121 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms