Protein–RNA interactions for Protein: Q16787

LAMA3, Laminin subunit alpha-3, humanhuman

Predictions only

Length 3,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3Q16787 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LAMA3Q16787 Y_RNA.355-201ENST00000365462 98 ntBASIC3.09□□□□□ -1.91
LAMA3Q16787 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.09□□□□□ -1.91
LAMA3Q16787 AC008280.2-201ENST00000455473 307 ntBASIC3.09□□□□□ -1.91
LAMA3Q16787 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.09□□□□□ -1.91
LAMA3Q16787 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LAMA3Q16787 AC015917.1-201ENST00000579654 510 ntBASIC3.09□□□□□ -1.91
LAMA3Q16787 AC008638.3-201ENST00000603341 463 ntBASIC3.09□□□□□ -1.91
LAMA3Q16787 AC015871.2-201ENST00000603605 948 ntBASIC3.09□□□□□ -1.91
LAMA3Q16787 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
LAMA3Q16787 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LAMA3Q16787 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC3.09□□□□□ -1.91
LAMA3Q16787 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.09□□□□□ -1.91
LAMA3Q16787 NSRP1P1-201ENST00000444067 1693 ntBASIC3.09□□□□□ -1.92
LAMA3Q16787 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.09□□□□□ -1.92
LAMA3Q16787 MAPK10-320ENST00000641462 6696 ntBASIC3.09□□□□□ -1.92
LAMA3Q16787 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.09□□□□□ -1.92
LAMA3Q16787 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.09□□□□□ -1.92
LAMA3Q16787 OR9N1P-201ENST00000491296 333 ntBASIC3.09□□□□□ -1.92
LAMA3Q16787 AP000859.1-201ENST00000525536 307 ntBASIC3.09□□□□□ -1.92
LAMA3Q16787 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.09□□□□□ -1.92
LAMA3Q16787 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.09□□□□□ -1.92
LAMA3Q16787 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
LAMA3Q16787 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LAMA3Q16787 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
LAMA3Q16787 AC006020.1-201ENST00000420179 1854 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
LAMA3Q16787 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAMA3Q16787 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAMA3Q16787 RNU1-112P-201ENST00000364401 164 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.08□□□□□ -1.92
LAMA3Q16787 DNAJC19P1-201ENST00000455312 319 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 TRBV8-2-201ENST00000475637 270 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.08□□□□□ -1.92
LAMA3Q16787 AC009163.5-201ENST00000575421 637 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 NTAN1P1-201ENST00000603150 646 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
LAMA3Q16787 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
LAMA3Q16787 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LAMA3Q16787 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAMA3Q16787 Y_RNA.338-201ENST00000365320 114 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 Y_RNA.540-201ENST00000384638 111 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 MIR592-201ENST00000384959 97 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 HMGB3P18-201ENST00000406327 590 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 RPL7P8-201ENST00000411964 730 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAMA3Q16787 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.08□□□□□ -1.92
LAMA3Q16787 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.08□□□□□ -1.92
LAMA3Q16787 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.08□□□□□ -1.92
LAMA3Q16787 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
LAMA3Q16787 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
LAMA3Q16787 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.08□□□□□ -1.92
LAMA3Q16787 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAMA3Q16787 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAMA3Q16787 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAMA3Q16787 DUTP6-201ENST00000425573 462 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 AC146507.2-201ENST00000460608 476 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 OR7A8P-201ENST00000595427 913 ntBASIC3.08□□□□□ -1.92
LAMA3Q16787 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LAMA3Q16787 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LAMA3Q16787 THAP12P8-201ENST00000447914 2115 ntBASIC3.07□□□□□ -1.92
LAMA3Q16787 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC3.07□□□□□ -1.92
LAMA3Q16787 AC000403.1-201ENST00000613696 3585 ntBASIC3.07□□□□□ -1.92
LAMA3Q16787 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LAMA3Q16787 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LAMA3Q16787 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LAMA3Q16787 AL139039.1-201ENST00000401900 692 ntBASIC3.07□□□□□ -1.92
LAMA3Q16787 HSPE1P8-201ENST00000406997 288 ntBASIC3.07□□□□□ -1.92
LAMA3Q16787 NIPA2P5-201ENST00000452282 464 ntBASIC3.07□□□□□ -1.92
LAMA3Q16787 SEPT14P1-201ENST00000458703 648 ntBASIC3.07□□□□□ -1.92
LAMA3Q16787 RPS26P3-201ENST00000470205 348 ntBASIC3.07□□□□□ -1.92
LAMA3Q16787 AC069499.1-201ENST00000489433 509 ntBASIC3.07□□□□□ -1.92
LAMA3Q16787 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.07□□□□□ -1.92
LAMA3Q16787 TRAV37-201ENST00000553906 342 ntBASIC3.07□□□□□ -1.92
LAMA3Q16787 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.07□□□□□ -1.92
LAMA3Q16787 OR4K7P-201ENST00000580232 945 ntBASIC3.07□□□□□ -1.92
LAMA3Q16787 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.07□□□□□ -1.92
LAMA3Q16787 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.07□□□□□ -1.92
LAMA3Q16787 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.07□□□□□ -1.92
LAMA3Q16787 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LAMA3Q16787 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.07□□□□□ -1.92
LAMA3Q16787 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LAMA3Q16787 B3GNT2P1-201ENST00000434960 952 ntBASIC3.07□□□□□ -1.92
LAMA3Q16787 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LAMA3Q16787 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LAMA3Q16787 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.07□□□□□ -1.92
LAMA3Q16787 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
LAMA3Q16787 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LAMA3Q16787 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LAMA3Q16787 OR5H5P-201ENST00000503164 928 ntBASIC3.06□□□□□ -1.92
LAMA3Q16787 RNA5SP148-201ENST00000516527 94 ntBASIC3.06□□□□□ -1.92
LAMA3Q16787 SNORA70.19-201ENST00000516717 90 ntBASIC3.06□□□□□ -1.92
LAMA3Q16787 RN7SKP272-201ENST00000516988 232 ntBASIC3.06□□□□□ -1.92
LAMA3Q16787 AC107934.2-201ENST00000518653 310 ntBASIC3.06□□□□□ -1.92
LAMA3Q16787 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.06□□□□□ -1.92
LAMA3Q16787 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.06□□□□□ -1.92
LAMA3Q16787 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LAMA3Q16787 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LAMA3Q16787 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms