Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.83□□□□□ -1.8
CACNA1SQ13698 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.83□□□□□ -1.8
CACNA1SQ13698 AL512310.1-201ENST00000548639 172 ntBASIC3.83□□□□□ -1.8
CACNA1SQ13698 CD24P2-201ENST00000565486 219 ntBASIC3.83□□□□□ -1.8
CACNA1SQ13698 Z82195.1-201ENST00000604558 398 ntBASIC3.83□□□□□ -1.8
CACNA1SQ13698 AL365400.2-201ENST00000605604 902 ntBASIC3.83□□□□□ -1.8
CACNA1SQ13698 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.83□□□□□ -1.8
CACNA1SQ13698 CYCSP41-201ENST00000616920 296 ntBASIC3.83□□□□□ -1.8
CACNA1SQ13698 IGHVIII-44-202ENST00000636235 289 ntBASIC3.83□□□□□ -1.8
CACNA1SQ13698 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1SQ13698 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.83□□□□□ -1.8
CACNA1SQ13698 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1SQ13698 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.82□□□□□ -1.8
CACNA1SQ13698 AC009302.1-201ENST00000417147 390 ntBASIC3.82□□□□□ -1.8
CACNA1SQ13698 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.82□□□□□ -1.8
CACNA1SQ13698 AC107918.3-201ENST00000533272 382 ntBASIC3.82□□□□□ -1.8
CACNA1SQ13698 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1SQ13698 MIR4425-201ENST00000580572 84 ntBASIC3.82□□□□□ -1.8
CACNA1SQ13698 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.82□□□□□ -1.8
CACNA1SQ13698 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1SQ13698 RPL23AP92-201ENST00000603609 255 ntBASIC3.82□□□□□ -1.8
CACNA1SQ13698 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.82□□□□□ -1.8
CACNA1SQ13698 AP003485.2-201ENST00000623636 610 ntBASIC3.82□□□□□ -1.8
CACNA1SQ13698 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1SQ13698 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA1SQ13698 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA1SQ13698 FTLP6-201ENST00000355274 422 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 RNU4-82P-201ENST00000362443 140 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 RNU6-1320P-201ENST00000390838 107 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 RNU6-1269P-201ENST00000391139 107 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 Z98941.1-201ENST00000407764 100 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 RHEBP3-201ENST00000411920 351 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 RANP4-201ENST00000413361 655 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 RIOK3P1-201ENST00000418778 1528 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 AC108938.1-201ENST00000451204 136 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 RNU6-599P-201ENST00000459383 107 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 RNU6-1193P-201ENST00000459461 107 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 AC114982.2-201ENST00000461396 358 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 PRELID3BP7-201ENST00000503606 469 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 MIR2114-201ENST00000516645 80 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 AP001636.2-201ENST00000525517 696 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.81□□□□□ -1.8
CACNA1SQ13698 TGIF1P1-201ENST00000558095 802 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.81□□□□□ -1.8
CACNA1SQ13698 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.81□□□□□ -1.8
CACNA1SQ13698 AC104984.5-201ENST00000586878 94 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 RNU6-368P-201ENST00000620928 107 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 RNU6-538P-201ENST00000622329 107 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.81□□□□□ -1.8
CACNA1SQ13698 AC005183.1-201ENST00000603687 1979 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.81□□□□□ -1.8
CACNA1SQ13698 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.81□□□□□ -1.8
CACNA1SQ13698 AL139281.1-201ENST00000422120 335 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 ISCA1P2-201ENST00000438679 421 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 RPS12P18-201ENST00000442381 270 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 AC103783.1-201ENST00000520506 373 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CACNA1SQ13698 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.81□□□□□ -1.8
CACNA1SQ13698 AC008507.1-201ENST00000587506 734 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 PRELID3BP8-201ENST00000604148 295 ntBASIC3.81□□□□□ -1.8
CACNA1SQ13698 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.81□□□□□ -1.8
CACNA1SQ13698 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CACNA1SQ13698 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 RN7SKP222-201ENST00000410651 315 ntBASIC3.8□□□□□ -1.8
CACNA1SQ13698 RPL30P2-201ENST00000414021 291 ntBASIC3.8□□□□□ -1.8
CACNA1SQ13698 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 AC010401.1-201ENST00000463867 348 ntBASIC3.8□□□□□ -1.8
CACNA1SQ13698 AC117440.1-201ENST00000474107 571 ntBASIC3.8□□□□□ -1.8
CACNA1SQ13698 RNA5SP367-201ENST00000516557 118 ntBASIC3.8□□□□□ -1.8
CACNA1SQ13698 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 AL139174.1-201ENST00000531489 886 ntBASIC3.8□□□□□ -1.8
CACNA1SQ13698 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 RPL12P50-201ENST00000603116 116 ntBASIC3.8□□□□□ -1.8
CACNA1SQ13698 AC004832.5-201ENST00000608677 401 ntBASIC3.8□□□□□ -1.8
CACNA1SQ13698 RMST_8.1-201ENST00000610287 165 ntBASIC3.8□□□□□ -1.8
CACNA1SQ13698 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA1SQ13698 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA1SQ13698 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CACNA1SQ13698 LINC01355-201ENST00000566551 5444 ntBASIC3.8□□□□□ -1.8
CACNA1SQ13698 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CACNA1SQ13698 RNU6-859P-201ENST00000362728 107 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 RNU6-984P-201ENST00000363236 109 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CACNA1SQ13698 RPS4XP8-201ENST00000402039 771 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 RNU6-233P-201ENST00000410845 141 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.79□□□□□ -1.8
CACNA1SQ13698 AC073069.1-201ENST00000428657 441 ntBASIC3.79□□□□□ -1.8
CACNA1SQ13698 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.79□□□□□ -1.8
CACNA1SQ13698 AL357520.1-201ENST00000441557 453 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms