Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.16□□□□□ -1.74
GABPAQ06546 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GABPAQ06546 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
GABPAQ06546 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GABPAQ06546 AL592494.2-201ENST00000425455 1548 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.16□□□□□ -1.74
GABPAQ06546 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.15□□□□□ -1.74
GABPAQ06546 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
GABPAQ06546 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
GABPAQ06546 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.15□□□□□ -1.75
GABPAQ06546 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
GABPAQ06546 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
GABPAQ06546 FRG1CP-201ENST00000358464 769 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
GABPAQ06546 MTATP6P31-201ENST00000406985 692 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.15□□□□□ -1.75
GABPAQ06546 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.15□□□□□ -1.75
GABPAQ06546 AL158156.1-201ENST00000422509 473 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 AC073310.1-201ENST00000423226 1033 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.15□□□□□ -1.75
GABPAQ06546 IFNNP1-201ENST00000429219 553 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 AC006994.1-201ENST00000438212 839 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.15□□□□□ -1.75
GABPAQ06546 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
GABPAQ06546 AC008379.1-201ENST00000463655 464 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.15□□□□□ -1.75
GABPAQ06546 RN7SL594P-201ENST00000470590 287 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 RPL23AP71-201ENST00000470966 469 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 AC084357.1-201ENST00000473404 255 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 AC015908.1-201ENST00000478739 476 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 AC093663.1-201ENST00000497190 394 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 AL035404.1-201ENST00000497982 568 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
GABPAQ06546 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.15□□□□□ -1.75
GABPAQ06546 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.15□□□□□ -1.75
GABPAQ06546 AP006245.1-201ENST00000522549 120 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.15□□□□□ -1.75
GABPAQ06546 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.15□□□□□ -1.75
GABPAQ06546 AP003717.3-201ENST00000544832 1180 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.15□□□□□ -1.75
GABPAQ06546 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.15□□□□□ -1.75
GABPAQ06546 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.15□□□□□ -1.75
GABPAQ06546 AP005229.2-201ENST00000609980 697 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 AL442067.2-201ENST00000614033 363 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 STMN1P1-201ENST00000617809 440 ntBASIC4.15□□□□□ -1.75
GABPAQ06546 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.15□□□□□ -1.75
GABPAQ06546 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
GABPAQ06546 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
GABPAQ06546 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.15□□□□□ -1.75
GABPAQ06546 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
GABPAQ06546 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
GABPAQ06546 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
GABPAQ06546 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
GABPAQ06546 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
GABPAQ06546 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
GABPAQ06546 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
GABPAQ06546 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
GABPAQ06546 AL445437.1-201ENST00000623157 3087 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
GABPAQ06546 AC073346.2-201ENST00000624724 2058 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
GABPAQ06546 ENSAP3-201ENST00000312710 333 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
GABPAQ06546 AP002784.2-201ENST00000397300 549 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 RPL31P52-201ENST00000407532 367 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
GABPAQ06546 BX842559.1-201ENST00000419615 532 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.14□□□□□ -1.75
GABPAQ06546 AC005300.1-201ENST00000428401 373 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 AC073069.1-201ENST00000428657 441 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.14□□□□□ -1.75
GABPAQ06546 YWHAEP5-201ENST00000431545 765 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.14□□□□□ -1.75
GABPAQ06546 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.14□□□□□ -1.75
GABPAQ06546 AL121877.1-201ENST00000453704 622 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.14□□□□□ -1.75
GABPAQ06546 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.14□□□□□ -1.75
GABPAQ06546 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.14□□□□□ -1.75
GABPAQ06546 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.14□□□□□ -1.75
GABPAQ06546 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
GABPAQ06546 AC008565.1-201ENST00000509046 885 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 IGKV2-26-201ENST00000518305 343 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
GABPAQ06546 AC083923.1-201ENST00000523708 376 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.14□□□□□ -1.75
GABPAQ06546 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.14□□□□□ -1.75
GABPAQ06546 PCNAP1-202ENST00000595299 752 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 ABI1P1-201ENST00000603375 1120 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.14□□□□□ -1.75
GABPAQ06546 AC112503.2-201ENST00000609005 552 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 AC006946.3-201ENST00000609791 756 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 AC123768.4-201ENST00000616244 701 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 AC009318.3-201ENST00000616916 503 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 FRG1HP-204ENST00000617940 757 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 AC253576.2-201ENST00000618815 580 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.14□□□□□ -1.75
GABPAQ06546 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.14□□□□□ -1.75
GABPAQ06546 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.14□□□□□ -1.75
GABPAQ06546 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms