Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CALD1Q05682 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
CALD1Q05682 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.84□□□□□ -1.64
CALD1Q05682 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CALD1Q05682 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
CALD1Q05682 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CALD1Q05682 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
CALD1Q05682 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CALD1Q05682 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CALD1Q05682 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CALD1Q05682 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CALD1Q05682 MIR134-201ENST00000385258 73 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 SOD2P1-201ENST00000396543 562 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 AP002784.2-201ENST00000397300 549 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CALD1Q05682 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.83□□□□□ -1.64
CALD1Q05682 FABP5P3-201ENST00000437960 408 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 AC122718.1-201ENST00000439448 744 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 AC092170.1-201ENST00000440211 356 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CALD1Q05682 FAM133DP-201ENST00000464802 691 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 TRAV31-201ENST00000502780 342 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 BTF3L4P4-201ENST00000506381 449 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 AC110792.2-201ENST00000510278 224 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 AC005798.1-201ENST00000513715 387 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 HMGN1P15-201ENST00000513870 295 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.83□□□□□ -1.64
CALD1Q05682 AL442163.2-201ENST00000553912 710 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.83□□□□□ -1.64
CALD1Q05682 MIR4458-201ENST00000578872 75 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 MTATP6P2-201ENST00000603319 678 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 BRDTP1-201ENST00000605735 677 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.83□□□□□ -1.64
CALD1Q05682 AC018926.3-201ENST00000618841 406 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 C2orf27A-204ENST00000623058 969 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 AL356863.1-201ENST00000623378 1080 ntBASIC4.83□□□□□ -1.64
CALD1Q05682 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CALD1Q05682 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CALD1Q05682 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CALD1Q05682 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CALD1Q05682 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CALD1Q05682 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.82□□□□□ -1.64
CALD1Q05682 LINC00561-201ENST00000565815 2738 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CALD1Q05682 RNU6-354P-201ENST00000383862 107 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 RNU6-610P-201ENST00000384264 107 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 HMGN2P8-201ENST00000391458 268 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.82□□□□□ -1.64
CALD1Q05682 SNORA11C-201ENST00000408532 129 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.82□□□□□ -1.64
CALD1Q05682 DEFB130D-201ENST00000426866 237 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AC018644.1-201ENST00000429934 551 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.82□□□□□ -1.64
CALD1Q05682 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.82□□□□□ -1.64
CALD1Q05682 HMGB1P45-201ENST00000435986 653 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 HSFY3P-201ENST00000444242 1191 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 CDC27P1-201ENST00000445384 715 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AL133547.1-201ENST00000448546 220 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.82□□□□□ -1.64
CALD1Q05682 GTF2IP12-201ENST00000456547 356 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.82□□□□□ -1.64
CALD1Q05682 AL049829.1-201ENST00000465411 156 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 RN7SL542P-201ENST00000467147 294 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.82□□□□□ -1.64
CALD1Q05682 ACTR3P3-201ENST00000480448 893 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.82□□□□□ -1.64
CALD1Q05682 NAMPTP2-201ENST00000505629 1115 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.82□□□□□ -1.64
CALD1Q05682 OR5H4P-201ENST00000510851 923 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AC021146.1-201ENST00000511202 716 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 RNU1-45P-201ENST00000517191 141 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AC007991.1-201ENST00000522680 631 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 MED28P5-201ENST00000528254 438 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.82□□□□□ -1.64
CALD1Q05682 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.82□□□□□ -1.64
CALD1Q05682 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.82□□□□□ -1.64
CALD1Q05682 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.82□□□□□ -1.64
CALD1Q05682 AC095057.3-201ENST00000567102 1157 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.82□□□□□ -1.64
CALD1Q05682 AC124283.4-201ENST00000581815 456 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.82□□□□□ -1.64
CALD1Q05682 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.82□□□□□ -1.64
CALD1Q05682 AC083899.3-201ENST00000603413 594 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 AC008121.2-201ENST00000614647 523 ntBASIC4.82□□□□□ -1.64
CALD1Q05682 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CALD1Q05682 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CALD1Q05682 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CALD1Q05682 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
CALD1Q05682 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CALD1Q05682 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CALD1Q05682 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CALD1Q05682 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.81□□□□□ -1.64
CALD1Q05682 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.81□□□□□ -1.64
CALD1Q05682 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CALD1Q05682 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.81□□□□□ -1.64
CALD1Q05682 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CALD1Q05682 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CALD1Q05682 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CALD1Q05682 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms