Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC106785.3-201ENST00000564064 847 ntBASIC1.87□□□□□ -2.11
HSPG2P98160 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HSPG2P98160 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HSPG2P98160 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
HSPG2P98160 AC092079.1-201ENST00000558620 1985 ntBASIC1.87□□□□□ -2.11
HSPG2P98160 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HSPG2P98160 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC1.87□□□□□ -2.11
HSPG2P98160 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HSPG2P98160 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC1.87□□□□□ -2.11
HSPG2P98160 RPS3AP50-201ENST00000487064 803 ntBASIC1.87□□□□□ -2.11
HSPG2P98160 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.87□□□□□ -2.11
HSPG2P98160 RFPL4AP3-201ENST00000515267 345 ntBASIC1.87□□□□□ -2.11
HSPG2P98160 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HSPG2P98160 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC1.87□□□□□ -2.11
HSPG2P98160 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.87□□□□□ -2.11
HSPG2P98160 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC1.87□□□□□ -2.11
HSPG2P98160 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.87□□□□□ -2.11
HSPG2P98160 AP001004.1-201ENST00000582468 324 ntBASIC1.87□□□□□ -2.11
HSPG2P98160 AC099506.2-201ENST00000623074 221 ntBASIC1.87□□□□□ -2.11
HSPG2P98160 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC1.87□□□□□ -2.11
HSPG2P98160 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
HSPG2P98160 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 RNA5SP68-201ENST00000363885 119 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 RPL7L1P1-201ENST00000448259 785 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC1.86□□□□□ -2.11
HSPG2P98160 RPL36AP21-201ENST00000490372 323 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 KLHL2P1-201ENST00000508691 521 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC1.86□□□□□ -2.11
HSPG2P98160 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.86□□□□□ -2.11
HSPG2P98160 AC007954.1-201ENST00000554198 494 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 AC016727.1-205ENST00000605437 569 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 AC074276.2-201ENST00000619891 348 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
HSPG2P98160 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC1.86□□□□□ -2.11
HSPG2P98160 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.86□□□□□ -2.11
HSPG2P98160 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.86□□□□□ -2.11
HSPG2P98160 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC1.86□□□□□ -2.11
HSPG2P98160 RNA5SP458-201ENST00000516188 119 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
HSPG2P98160 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC1.86□□□□□ -2.11
HSPG2P98160 OR5BR1P-201ENST00000524992 1330 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC1.86□□□□□ -2.11
HSPG2P98160 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC1.86□□□□□ -2.11
HSPG2P98160 OSBPL9P4-201ENST00000371707 1800 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.86□□□□□ -2.11
HSPG2P98160 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC1.86□□□□□ -2.11
HSPG2P98160 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
HSPG2P98160 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
HSPG2P98160 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 AC008079.2-201ENST00000623543 20396 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 MIR489-201ENST00000384923 84 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 SNORA3.2-201ENST00000408221 125 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 B3GNT2P1-201ENST00000434960 952 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 AC112492.1-201ENST00000449607 712 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 AC025445.1-201ENST00000502728 300 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 AC083906.5-201ENST00000503722 328 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 BTF3L4P4-201ENST00000506381 449 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 OR5AP1P-201ENST00000529730 940 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.86□□□□□ -2.11
HSPG2P98160 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.86□□□□□ -2.11
HSPG2P98160 AC044913.1-201ENST00000557200 430 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 AL157817.1-201ENST00000614264 790 ntBASIC1.86□□□□□ -2.11
HSPG2P98160 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HSPG2P98160 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HSPG2P98160 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HSPG2P98160 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC1.85□□□□□ -2.11
HSPG2P98160 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HSPG2P98160 STK31-205ENST00000433467 3085 ntTSL 2 BASIC1.85□□□□□ -2.11
HSPG2P98160 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HSPG2P98160 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HSPG2P98160 ELOCP18-201ENST00000434209 337 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 AC078785.3-201ENST00000476607 425 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 RPL23AP73-201ENST00000492507 471 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HSPG2P98160 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC1.85□□□□□ -2.11
HSPG2P98160 AC006840.1-201ENST00000623069 542 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC1.85□□□□□ -2.11
HSPG2P98160 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC1.85□□□□□ -2.11
HSPG2P98160 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HSPG2P98160 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HSPG2P98160 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
HSPG2P98160 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
HSPG2P98160 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HSPG2P98160 MIR196B-201ENST00000384852 84 ntBASIC1.85□□□□□ -2.11
HSPG2P98160 RPL7P8-201ENST00000411964 730 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms