Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.05□□□□□ -1.92
H3F3AP84243 AC115085.1-201ENST00000588924 229 ntBASIC3.05□□□□□ -1.92
H3F3AP84243 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
H3F3AP84243 FAM60CP-201ENST00000591086 664 ntBASIC3.05□□□□□ -1.92
H3F3AP84243 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.05□□□□□ -1.92
H3F3AP84243 AL354950.1-201ENST00000614150 568 ntBASIC3.05□□□□□ -1.92
H3F3AP84243 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.05□□□□□ -1.92
H3F3AP84243 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
H3F3AP84243 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
H3F3AP84243 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
H3F3AP84243 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
H3F3AP84243 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
H3F3AP84243 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
H3F3AP84243 AC092326.2-201ENST00000624772 1561 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 AL359715.4-201ENST00000606629 1436 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 AC007256.1-201ENST00000392253 2765 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 AC138915.3-201ENST00000562908 1389 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
H3F3AP84243 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.04□□□□□ -1.92
H3F3AP84243 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
H3F3AP84243 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
H3F3AP84243 RNA5SP189-201ENST00000364920 115 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
H3F3AP84243 RNU6-356P-201ENST00000384140 107 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 MIR490-201ENST00000384865 128 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 SNORA48.7-201ENST00000391302 135 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 RN7SKP27-201ENST00000410684 333 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.04□□□□□ -1.92
H3F3AP84243 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.04□□□□□ -1.92
H3F3AP84243 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.04□□□□□ -1.92
H3F3AP84243 AC008065.1-201ENST00000428525 348 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.04□□□□□ -1.92
H3F3AP84243 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.04□□□□□ -1.92
H3F3AP84243 AC044797.1-201ENST00000445744 679 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 NPM1P49-201ENST00000448027 714 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.04□□□□□ -1.92
H3F3AP84243 AC097262.1-201ENST00000452559 548 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.04□□□□□ -1.92
H3F3AP84243 RPS27P29-201ENST00000463110 252 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 AC093663.1-201ENST00000497190 394 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 AC112198.1-201ENST00000505369 1220 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.04□□□□□ -1.92
H3F3AP84243 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.04□□□□□ -1.92
H3F3AP84243 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.04□□□□□ -1.92
H3F3AP84243 OR4R3P-201ENST00000525084 838 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.04□□□□□ -1.92
H3F3AP84243 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.04□□□□□ -1.92
H3F3AP84243 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.04□□□□□ -1.92
H3F3AP84243 MIR5186-201ENST00000577504 120 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 MIR4429-201ENST00000580105 73 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.04□□□□□ -1.92
H3F3AP84243 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.04□□□□□ -1.92
H3F3AP84243 AC008739.3-201ENST00000603262 127 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 AC113194.1-201ENST00000606037 500 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 AC112503.1-201ENST00000608436 391 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.04□□□□□ -1.92
H3F3AP84243 AL355365.1-201ENST00000616480 294 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 MIR6075-201ENST00000620782 95 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 AC127502.3-201ENST00000636170 1206 ntBASIC3.04□□□□□ -1.92
H3F3AP84243 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.04□□□□□ -1.92
H3F3AP84243 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
H3F3AP84243 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
H3F3AP84243 DDX6P1-205ENST00000441966 1436 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.03□□□□□ -1.92
H3F3AP84243 AC017071.1-201ENST00000564407 2204 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
H3F3AP84243 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
H3F3AP84243 SNORA71.3-201ENST00000362582 128 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 SNORA31-201ENST00000362607 130 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 RNU6-618P-201ENST00000363518 112 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 RNU6-805P-201ENST00000365643 106 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 MIR183-201ENST00000384958 110 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.03□□□□□ -1.92
H3F3AP84243 Z99755.1-201ENST00000414048 380 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 AC069157.1-201ENST00000421749 137 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.03□□□□□ -1.92
H3F3AP84243 AL159987.2-201ENST00000432754 307 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 ARL4AP4-201ENST00000434170 518 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
H3F3AP84243 MTCYBP31-201ENST00000438855 1122 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 VN1R34P-201ENST00000447387 883 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
H3F3AP84243 AC008264.1-201ENST00000447612 367 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.03□□□□□ -1.92
H3F3AP84243 MTND2P8-201ENST00000450555 1025 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 RPL26P28-201ENST00000451325 435 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 HMGB3P15-201ENST00000507326 574 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 RNU6-1308P-201ENST00000516817 103 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 RN7SKP289-201ENST00000517244 295 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 HMGB1P23-201ENST00000518743 568 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 AP001636.2-201ENST00000525517 696 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.03□□□□□ -1.92
H3F3AP84243 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.03□□□□□ -1.92
H3F3AP84243 TRAV37-201ENST00000553906 342 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.03□□□□□ -1.92
H3F3AP84243 AC015802.5-201ENST00000607478 399 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.03□□□□□ -1.92
H3F3AP84243 AC107294.3-201ENST00000609211 526 ntBASIC3.03□□□□□ -1.92
H3F3AP84243 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.03□□□□□ -1.92
H3F3AP84243 AC015967.1-201ENST00000619893 476 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms