Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 RPL31P45-201ENST00000419532 356 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AL953862.1-201ENST00000423016 168 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 RPS12P5-201ENST00000423449 371 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.67□□□□□ -1.82
CX3CL1P78423 USP9YP10-201ENST00000454868 628 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CX3CL1P78423 RNU7-125P-201ENST00000458760 62 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AC097493.1-201ENST00000463958 372 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 RPL7P22-201ENST00000466005 733 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AC022034.3-201ENST00000471393 478 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 AC012158.1-204ENST00000483430 465 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 AC231760.1-201ENST00000498002 260 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AC104685.1-201ENST00000502445 371 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AC025445.1-201ENST00000502728 300 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 OR5H5P-201ENST00000503164 928 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AC114981.1-201ENST00000503897 678 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 MTCO3P44-201ENST00000510977 541 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 USP9YP5-201ENST00000511770 630 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 RNA5SP154-201ENST00000516193 111 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.67□□□□□ -1.82
CX3CL1P78423 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
CX3CL1P78423 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.67□□□□□ -1.82
CX3CL1P78423 AC100770.1-201ENST00000532310 322 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.67□□□□□ -1.82
CX3CL1P78423 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.67□□□□□ -1.82
CX3CL1P78423 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.67□□□□□ -1.82
CX3CL1P78423 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.67□□□□□ -1.82
CX3CL1P78423 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.67□□□□□ -1.82
CX3CL1P78423 HSPE1P3-201ENST00000559254 309 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AC015912.2-201ENST00000571053 181 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 MIR4270-201ENST00000581799 70 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.67□□□□□ -1.82
CX3CL1P78423 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 AC073091.2-201ENST00000603205 907 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 LLPHP1-201ENST00000603571 367 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 BNIP3P11-201ENST00000603878 563 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AC018714.1-201ENST00000605028 208 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 VIS1.1-201ENST00000610517 203 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 AC100827.5-201ENST00000615883 426 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CL1P78423 U3.53-201ENST00000628922 216 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 CYP3A51P-201ENST00000633513 256 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CX3CL1P78423 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CX3CL1P78423 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CX3CL1P78423 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CX3CL1P78423 GDI2P1-201ENST00000429312 1336 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.67□□□□□ -1.82
CX3CL1P78423 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CX3CL1P78423 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CL1P78423 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CL1P78423 AL391684.1-202ENST00000641293 1636 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CL1P78423 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.66□□□□□ -1.82
CX3CL1P78423 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CL1P78423 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CL1P78423 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CL1P78423 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CL1P78423 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CL1P78423 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CX3CL1P78423 SNORD82-201ENST00000365530 70 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.66□□□□□ -1.82
CX3CL1P78423 CYCSP45-201ENST00000402289 315 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 OFD1P18Y-201ENST00000420889 959 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 USP9YP26-201ENST00000421008 661 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.66□□□□□ -1.82
CX3CL1P78423 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.66□□□□□ -1.82
CX3CL1P78423 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.66□□□□□ -1.82
CX3CL1P78423 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.66□□□□□ -1.82
CX3CL1P78423 MTND4P6-201ENST00000438297 472 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.66□□□□□ -1.82
CX3CL1P78423 MTATP6P26-201ENST00000445926 662 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.66□□□□□ -1.82
CX3CL1P78423 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.66□□□□□ -1.82
CX3CL1P78423 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.66□□□□□ -1.82
CX3CL1P78423 RPL23AP35-201ENST00000451906 501 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.66□□□□□ -1.82
CX3CL1P78423 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.66□□□□□ -1.82
CX3CL1P78423 ISCUP1-201ENST00000454451 448 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 FGF7P3-201ENST00000454645 303 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.66□□□□□ -1.82
CX3CL1P78423 SCARNA10-201ENST00000459255 330 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CX3CL1P78423 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.66□□□□□ -1.82
CX3CL1P78423 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.66□□□□□ -1.82
CX3CL1P78423 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.66□□□□□ -1.82
CX3CL1P78423 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.66□□□□□ -1.82
CX3CL1P78423 AC105129.1-201ENST00000560250 297 ntBASIC3.66□□□□□ -1.82
CX3CL1P78423 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.66□□□□□ -1.82
CX3CL1P78423 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms