Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC1.98□□□□□ -2.09
RPL39P62891 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC1.98□□□□□ -2.09
RPL39P62891 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.98□□□□□ -2.09
RPL39P62891 RPL37P1-201ENST00000432310 284 ntBASIC1.98□□□□□ -2.09
RPL39P62891 AL606490.7-201ENST00000433136 191 ntBASIC1.98□□□□□ -2.09
RPL39P62891 KCTD10P1-201ENST00000434203 625 ntBASIC1.98□□□□□ -2.09
RPL39P62891 AC091862.1-201ENST00000438016 1100 ntBASIC1.98□□□□□ -2.09
RPL39P62891 AC093156.1-201ENST00000440382 670 ntBASIC1.98□□□□□ -2.09
RPL39P62891 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.98□□□□□ -2.09
RPL39P62891 RPS27P5-201ENST00000444247 244 ntBASIC1.98□□□□□ -2.09
RPL39P62891 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC1.98□□□□□ -2.09
RPL39P62891 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.98□□□□□ -2.09
RPL39P62891 RPS20P32-201ENST00000456044 356 ntBASIC1.98□□□□□ -2.09
RPL39P62891 AC091153.1-201ENST00000466297 402 ntBASIC1.98□□□□□ -2.09
RPL39P62891 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.98□□□□□ -2.09
RPL39P62891 AC103987.1-201ENST00000473394 348 ntBASIC1.98□□□□□ -2.09
RPL39P62891 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.98□□□□□ -2.09
RPL39P62891 RNU6-826P-201ENST00000516827 104 ntBASIC1.98□□□□□ -2.09
RPL39P62891 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.98□□□□□ -2.09
RPL39P62891 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC1.98□□□□□ -2.09
RPL39P62891 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC1.98□□□□□ -2.09
RPL39P62891 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC1.98□□□□□ -2.09
RPL39P62891 MIR3605-201ENST00000583214 100 ntBASIC1.98□□□□□ -2.09
RPL39P62891 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC1.98□□□□□ -2.09
RPL39P62891 AL606834.2-201ENST00000602954 668 ntBASIC1.98□□□□□ -2.09
RPL39P62891 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.98□□□□□ -2.09
RPL39P62891 AC006111.3-201ENST00000622137 383 ntBASIC1.98□□□□□ -2.09
RPL39P62891 AC048347.1-201ENST00000624621 427 ntBASIC1.98□□□□□ -2.09
RPL39P62891 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RPL39P62891 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC1.98□□□□□ -2.09
RPL39P62891 MTCO1P14-201ENST00000441695 1559 ntBASIC1.98□□□□□ -2.09
RPL39P62891 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC1.97□□□□□ -2.09
RPL39P62891 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
RPL39P62891 OR5BR1P-201ENST00000524992 1330 ntBASIC1.97□□□□□ -2.09
RPL39P62891 AC118273.1-201ENST00000525324 3006 ntBASIC1.97□□□□□ -2.09
RPL39P62891 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
RPL39P62891 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.97□□□□□ -2.09
RPL39P62891 FAM35BP-202ENST00000497389 3337 ntBASIC1.97□□□□□ -2.09
RPL39P62891 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC1.97□□□□□ -2.09
RPL39P62891 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.97□□□□□ -2.09
RPL39P62891 MIR554-201ENST00000384874 96 ntBASIC1.97□□□□□ -2.09
RPL39P62891 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC1.97□□□□□ -2.09
RPL39P62891 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC1.97□□□□□ -2.09
RPL39P62891 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RPL39P62891 AC006028.1-201ENST00000438379 402 ntBASIC1.97□□□□□ -2.09
RPL39P62891 EIF4A1P11-201ENST00000451239 222 ntBASIC1.97□□□□□ -2.09
RPL39P62891 RPS4XP10-201ENST00000465034 731 ntBASIC1.97□□□□□ -2.09
RPL39P62891 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC1.97□□□□□ -2.09
RPL39P62891 AC068724.1-201ENST00000487100 792 ntBASIC1.97□□□□□ -2.09
RPL39P62891 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.97□□□□□ -2.09
RPL39P62891 SCARNA13-201ENST00000516672 275 ntBASIC1.97□□□□□ -2.09
RPL39P62891 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RPL39P62891 OR4A45P-201ENST00000529954 901 ntBASIC1.97□□□□□ -2.09
RPL39P62891 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC1.97□□□□□ -2.09
RPL39P62891 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RPL39P62891 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC1.97□□□□□ -2.09
RPL39P62891 ZNF861P-201ENST00000588126 639 ntBASIC1.97□□□□□ -2.09
RPL39P62891 NF1P5-201ENST00000588287 448 ntBASIC1.97□□□□□ -2.09
RPL39P62891 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.97□□□□□ -2.09
RPL39P62891 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RPL39P62891 IGHV3-29-201ENST00000604817 344 ntBASIC1.97□□□□□ -2.09
RPL39P62891 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RPL39P62891 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.97□□□□□ -2.09
RPL39P62891 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RPL39P62891 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RPL39P62891 FAM35CP-201ENST00000554755 2470 ntBASIC1.97□□□□□ -2.09
RPL39P62891 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC1.96□□□□□ -2.1
RPL39P62891 AC006378.2-201ENST00000623178 2476 ntBASIC1.96□□□□□ -2.1
RPL39P62891 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RPL39P62891 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
RPL39P62891 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RPL39P62891 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC1.96□□□□□ -2.1
RPL39P62891 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RPL39P62891 MIR592-201ENST00000384959 97 ntBASIC1.96□□□□□ -2.1
RPL39P62891 SNORA57.1-201ENST00000391227 145 ntBASIC1.96□□□□□ -2.1
RPL39P62891 RN7SKP220-201ENST00000410611 288 ntBASIC1.96□□□□□ -2.1
RPL39P62891 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC1.96□□□□□ -2.1
RPL39P62891 AC005300.1-201ENST00000428401 373 ntBASIC1.96□□□□□ -2.1
RPL39P62891 AC097713.2-201ENST00000430199 356 ntBASIC1.96□□□□□ -2.1
RPL39P62891 ST13P20-201ENST00000447996 1065 ntBASIC1.96□□□□□ -2.1
RPL39P62891 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.96□□□□□ -2.1
RPL39P62891 AP000705.1-201ENST00000454567 350 ntBASIC1.96□□□□□ -2.1
RPL39P62891 RPL9P32-201ENST00000464118 620 ntBASIC1.96□□□□□ -2.1
RPL39P62891 OR2A20P-203ENST00000498397 1268 ntBASIC1.96□□□□□ -2.1
RPL39P62891 PANCR-201ENST00000503456 493 ntTSL 5 BASIC1.96□□□□□ -2.1
RPL39P62891 TBCAP3-201ENST00000512475 312 ntBASIC1.96□□□□□ -2.1
RPL39P62891 SOD1P3-201ENST00000518682 454 ntBASIC1.96□□□□□ -2.1
RPL39P62891 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC1.96□□□□□ -2.1
RPL39P62891 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC1.96□□□□□ -2.1
RPL39P62891 AL355836.1-201ENST00000555951 870 ntBASIC1.96□□□□□ -2.1
RPL39P62891 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.96□□□□□ -2.1
RPL39P62891 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.96□□□□□ -2.1
RPL39P62891 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.96□□□□□ -2.1
RPL39P62891 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC1.96□□□□□ -2.1
RPL39P62891 MIR5680-201ENST00000577577 84 ntBASIC1.96□□□□□ -2.1
RPL39P62891 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.96□□□□□ -2.1
RPL39P62891 AC007448.1-201ENST00000582714 234 ntBASIC1.96□□□□□ -2.1
RPL39P62891 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC1.96□□□□□ -2.1
RPL39P62891 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC1.96□□□□□ -2.1
RPL39P62891 AP000787.2-201ENST00000604432 568 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms