Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.51□□□□□ -1.85
LMO4P61968 VN1R90P-201ENST00000595717 726 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.51□□□□□ -1.85
LMO4P61968 AC107304.1-201ENST00000604229 296 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AC021749.1-201ENST00000604322 607 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AC106791.2-201ENST00000604680 391 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AC010738.1-201ENST00000604970 987 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AL008729.2-201ENST00000606393 473 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LMO4P61968 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.51□□□□□ -1.85
LMO4P61968 Z95327.2-201ENST00000414579 1873 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AL592182.3-201ENST00000642132 3304 ntBASIC3.51□□□□□ -1.85
LMO4P61968 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.51□□□□□ -1.85
LMO4P61968 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
LMO4P61968 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LMO4P61968 AC092104.1-201ENST00000497346 1441 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LMO4P61968 IQCB2P-201ENST00000401788 1633 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LMO4P61968 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LMO4P61968 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.51□□□□□ -1.85
LMO4P61968 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
LMO4P61968 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LMO4P61968 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
LMO4P61968 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.5□□□□□ -1.85
LMO4P61968 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
LMO4P61968 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LMO4P61968 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LMO4P61968 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.5□□□□□ -1.85
LMO4P61968 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.5□□□□□ -1.85
LMO4P61968 MTND5P29-201ENST00000458676 1807 ntBASIC3.5□□□□□ -1.85
LMO4P61968 RNU6-353P-201ENST00000364266 108 ntBASIC3.5□□□□□ -1.85
LMO4P61968 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
LMO4P61968 Y_RNA.559-201ENST00000384686 107 ntBASIC3.5□□□□□ -1.85
LMO4P61968 MIR525-201ENST00000384978 85 ntBASIC3.5□□□□□ -1.85
LMO4P61968 SNORD66.1-201ENST00000391230 76 ntBASIC3.5□□□□□ -1.85
LMO4P61968 ENSAP1-201ENST00000392855 326 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC025750.1-201ENST00000399891 379 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC009237.10-201ENST00000414112 510 ntBASIC3.5□□□□□ -1.85
LMO4P61968 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC027644.1-201ENST00000419595 298 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC006960.1-201ENST00000419980 153 ntBASIC3.5□□□□□ -1.85
LMO4P61968 RPL30P3-201ENST00000424262 333 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.5□□□□□ -1.85
LMO4P61968 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.5□□□□□ -1.85
LMO4P61968 AL356276.2-201ENST00000435919 558 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC129850.1-201ENST00000436203 508 ntBASIC3.5□□□□□ -1.85
LMO4P61968 MTCYBP39-201ENST00000437562 491 ntBASIC3.5□□□□□ -1.85
LMO4P61968 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.5□□□□□ -1.85
LMO4P61968 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.5□□□□□ -1.85
LMO4P61968 AL592437.1-201ENST00000443781 492 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC007327.1-201ENST00000447461 264 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.5□□□□□ -1.85
LMO4P61968 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.5□□□□□ -1.85
LMO4P61968 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
LMO4P61968 AC113347.3-201ENST00000509113 148 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.5□□□□□ -1.85
LMO4P61968 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.5□□□□□ -1.85
LMO4P61968 AC011352.1-201ENST00000512300 793 ntBASIC3.5□□□□□ -1.85
LMO4P61968 MTND1P5-201ENST00000517906 940 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.5□□□□□ -1.85
LMO4P61968 AC090151.1-201ENST00000520784 730 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.5□□□□□ -1.85
LMO4P61968 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LMO4P61968 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.5□□□□□ -1.85
LMO4P61968 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.5□□□□□ -1.85
LMO4P61968 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.5□□□□□ -1.85
LMO4P61968 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.5□□□□□ -1.85
LMO4P61968 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.5□□□□□ -1.85
LMO4P61968 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.5□□□□□ -1.85
LMO4P61968 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.5□□□□□ -1.85
LMO4P61968 ACTR3BP3-201ENST00000565577 979 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AGGF1P4-201ENST00000568249 801 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.5□□□□□ -1.85
LMO4P61968 MIR1254-2-201ENST00000579553 63 ntBASIC3.5□□□□□ -1.85
LMO4P61968 DUXAP11-201ENST00000603858 526 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AL031281.1-201ENST00000604049 488 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AL021997.1-201ENST00000605757 193 ntBASIC3.5□□□□□ -1.85
LMO4P61968 RNU4-89P-201ENST00000607443 133 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC073114.1-201ENST00000612027 490 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC122133.1-201ENST00000613964 233 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC105227.2-201ENST00000615075 605 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC243756.2-201ENST00000618406 463 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC005086.4-201ENST00000623065 213 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AC015871.5-202ENST00000623252 701 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AL359715.5-201ENST00000623431 443 ntBASIC3.5□□□□□ -1.85
LMO4P61968 BMS1P21-201ENST00000634565 365 ntBASIC3.5□□□□□ -1.85
LMO4P61968 AL392088.2-201ENST00000637607 285 ntBASIC3.5□□□□□ -1.85
LMO4P61968 ZNF663P-202ENST00000641770 1131 ntBASIC3.5□□□□□ -1.85
LMO4P61968 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.5□□□□□ -1.85
LMO4P61968 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LMO4P61968 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LMO4P61968 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LMO4P61968 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.5□□□□□ -1.85
LMO4P61968 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LMO4P61968 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
LMO4P61968 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.5□□□□□ -1.85
LMO4P61968 AC139713.2-215ENST00000641428 5037 ntBASIC3.5□□□□□ -1.85
LMO4P61968 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.5□□□□□ -1.85
LMO4P61968 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms