Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTP1P59025 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.7□□□□□ -1.5
RTP1P59025 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTP1P59025 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTP1P59025 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RTP1P59025 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTP1P59025 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTP1P59025 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTP1P59025 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTP1P59025 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
RTP1P59025 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTP1P59025 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RTP1P59025 MAPK10-263ENST00000641052 4307 ntBASIC5.69□□□□□ -1.5
RTP1P59025 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTP1P59025 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.69□□□□□ -1.5
RTP1P59025 AL157700.1-201ENST00000561973 1432 ntBASIC5.69□□□□□ -1.5
RTP1P59025 AC092376.2-201ENST00000622621 4116 ntBASIC5.69□□□□□ -1.5
RTP1P59025 Y_RNA.126-201ENST00000363382 111 ntBASIC5.69□□□□□ -1.5
RTP1P59025 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.69□□□□□ -1.5
RTP1P59025 SNORA62.2-201ENST00000364672 152 ntBASIC5.69□□□□□ -1.5
RTP1P59025 RNA5SP223-201ENST00000365174 120 ntBASIC5.69□□□□□ -1.5
RTP1P59025 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.69□□□□□ -1.5
RTP1P59025 RPS3AP36-201ENST00000398190 775 ntBASIC5.69□□□□□ -1.5
RTP1P59025 RPS3AP3-201ENST00000411933 242 ntBASIC5.69□□□□□ -1.5
RTP1P59025 AL953862.1-201ENST00000423016 168 ntBASIC5.69□□□□□ -1.5
RTP1P59025 MTCO1P20-201ENST00000425366 358 ntBASIC5.69□□□□□ -1.5
RTP1P59025 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.69□□□□□ -1.5
RTP1P59025 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.69□□□□□ -1.5
RTP1P59025 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.69□□□□□ -1.5
RTP1P59025 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.69□□□□□ -1.5
RTP1P59025 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.69□□□□□ -1.5
RTP1P59025 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.69□□□□□ -1.5
RTP1P59025 PGBD4P3-201ENST00000440731 581 ntBASIC5.69□□□□□ -1.5
RTP1P59025 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.69□□□□□ -1.5
RTP1P59025 RPL10P17-201ENST00000453852 316 ntBASIC5.69□□□□□ -1.5
RTP1P59025 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.69□□□□□ -1.5
RTP1P59025 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.69□□□□□ -1.5
RTP1P59025 AC098583.1-201ENST00000480875 255 ntBASIC5.69□□□□□ -1.5
RTP1P59025 MTCYBP17-201ENST00000503579 789 ntBASIC5.69□□□□□ -1.5
RTP1P59025 AC114981.1-201ENST00000503897 678 ntBASIC5.69□□□□□ -1.5
RTP1P59025 SAP18P1-201ENST00000512058 390 ntBASIC5.69□□□□□ -1.5
RTP1P59025 AP005639.2-201ENST00000527592 928 ntBASIC5.69□□□□□ -1.5
RTP1P59025 AC022878.1-201ENST00000530684 149 ntBASIC5.69□□□□□ -1.5
RTP1P59025 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.69□□□□□ -1.5
RTP1P59025 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.69□□□□□ -1.5
RTP1P59025 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.69□□□□□ -1.5
RTP1P59025 LSM3P2-201ENST00000551246 273 ntBASIC5.69□□□□□ -1.5
RTP1P59025 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.69□□□□□ -1.5
RTP1P59025 AC010680.3-201ENST00000604215 520 ntBASIC5.69□□□□□ -1.5
RTP1P59025 AC103710.4-201ENST00000609301 899 ntBASIC5.69□□□□□ -1.5
RTP1P59025 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.69□□□□□ -1.5
RTP1P59025 AC009159.1-201ENST00000618386 642 ntBASIC5.69□□□□□ -1.5
RTP1P59025 AC068880.5-201ENST00000624331 290 ntBASIC5.69□□□□□ -1.5
RTP1P59025 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTP1P59025 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.69□□□□□ -1.5
RTP1P59025 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.69□□□□□ -1.5
RTP1P59025 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTP1P59025 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTP1P59025 AL442128.2-201ENST00000620246 1824 ntBASIC5.69□□□□□ -1.5
RTP1P59025 AC093311.1-201ENST00000506586 2021 ntBASIC5.69□□□□□ -1.5
RTP1P59025 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTP1P59025 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RTP1P59025 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.68□□□□□ -1.5
RTP1P59025 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTP1P59025 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RTP1P59025 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.68□□□□□ -1.5
RTP1P59025 CDC27P2-201ENST00000425026 1922 ntBASIC5.68□□□□□ -1.5
RTP1P59025 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.68□□□□□ -1.5
RTP1P59025 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.68□□□□□ -1.5
RTP1P59025 PROS2P-201ENST00000474651 1951 ntBASIC5.68□□□□□ -1.5
RTP1P59025 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTP1P59025 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTP1P59025 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTP1P59025 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTP1P59025 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTP1P59025 AL356057.2-201ENST00000403318 432 ntBASIC5.68□□□□□ -1.5
RTP1P59025 FCF1P2-201ENST00000415284 583 ntBASIC5.68□□□□□ -1.5
RTP1P59025 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.68□□□□□ -1.5
RTP1P59025 AC004690.1-201ENST00000418216 328 ntBASIC5.68□□□□□ -1.5
RTP1P59025 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.68□□□□□ -1.5
RTP1P59025 AC092809.1-201ENST00000441469 474 ntBASIC5.68□□□□□ -1.5
RTP1P59025 RBMY2TP-201ENST00000451162 947 ntBASIC5.68□□□□□ -1.5
RTP1P59025 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.68□□□□□ -1.5
RTP1P59025 BX322784.1-201ENST00000455793 1077 ntBASIC5.68□□□□□ -1.5
RTP1P59025 RPS29P25-201ENST00000481709 171 ntBASIC5.68□□□□□ -1.5
RTP1P59025 RPS27P23-201ENST00000487608 251 ntBASIC5.68□□□□□ -1.5
RTP1P59025 AC011005.3-201ENST00000491624 395 ntBASIC5.68□□□□□ -1.5
RTP1P59025 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.68□□□□□ -1.5
RTP1P59025 AC114786.4-201ENST00000508771 728 ntBASIC5.68□□□□□ -1.5
RTP1P59025 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.68□□□□□ -1.5
RTP1P59025 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.68□□□□□ -1.5
RTP1P59025 CENPUP1-201ENST00000526649 1202 ntBASIC5.68□□□□□ -1.5
RTP1P59025 DEFB131D-201ENST00000526803 184 ntBASIC5.68□□□□□ -1.5
RTP1P59025 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.68□□□□□ -1.5
RTP1P59025 NMNAT1P1-201ENST00000554095 876 ntBASIC5.68□□□□□ -1.5
RTP1P59025 AL157687.1-201ENST00000554853 619 ntBASIC5.68□□□□□ -1.5
RTP1P59025 AC040958.1-201ENST00000561102 201 ntBASIC5.68□□□□□ -1.5
RTP1P59025 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.68□□□□□ -1.5
RTP1P59025 AL391840.1-201ENST00000571144 367 ntBASIC5.68□□□□□ -1.5
RTP1P59025 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms