Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RPL21P12-201ENST00000559810 515 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF9P41273 AP001180.3-201ENST00000582221 145 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF9P41273 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF9P41273 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF9P41273 AL139286.1-201ENST00000604465 483 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF9P41273 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF9P41273 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.63□□□□□ -1.83
TNFSF9P41273 AP001002.2-201ENST00000625137 386 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TNFSF9P41273 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.63□□□□□ -1.83
TNFSF9P41273 AC138393.1-206ENST00000540997 1886 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.62□□□□□ -1.83
TNFSF9P41273 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF9P41273 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.62□□□□□ -1.83
TNFSF9P41273 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF9P41273 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF9P41273 CR383658.2-201ENST00000547576 1525 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 RNA5SP120-201ENST00000410900 112 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 HMGN1P24-201ENST00000412282 298 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 AC010385.1-201ENST00000412374 256 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 AC009237.5-201ENST00000414271 501 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF9P41273 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF9P41273 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF9P41273 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF9P41273 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF9P41273 Z75741.1-201ENST00000446793 314 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 MRPS31P2-201ENST00000451581 518 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF9P41273 RPL37P3-201ENST00000456825 293 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 BTF3P5-201ENST00000457252 467 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 AC111193.1-201ENST00000504097 155 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.62□□□□□ -1.83
TNFSF9P41273 AC108157.1-201ENST00000510511 539 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 RN7SKP116-201ENST00000516902 319 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF9P41273 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFSF9P41273 AC093014.1-201ENST00000548926 724 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 AP000919.1-202ENST00000581139 1264 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF9P41273 ZNF415P1-201ENST00000582279 1166 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 AF131215.7-201ENST00000602443 707 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 SUMO2P14-201ENST00000604488 293 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 MIR3651-201ENST00000630427 90 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.62□□□□□ -1.83
TNFSF9P41273 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF9P41273 DCAF13P3-201ENST00000561147 1334 ntBASIC3.62□□□□□ -1.83
TNFSF9P41273 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF9P41273 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF9P41273 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFSF9P41273 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
TNFSF9P41273 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFSF9P41273 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TNFSF9P41273 MIR30E-201ENST00000362104 92 ntBASIC3.61□□□□□ -1.83
TNFSF9P41273 AL356968.1-201ENST00000416622 474 ntBASIC3.61□□□□□ -1.83
TNFSF9P41273 AC244453.4-201ENST00000419150 388 ntBASIC3.61□□□□□ -1.83
TNFSF9P41273 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFSF9P41273 AL591503.2-201ENST00000442314 1005 ntBASIC3.61□□□□□ -1.83
TNFSF9P41273 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.61□□□□□ -1.83
TNFSF9P41273 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFSF9P41273 AC104687.1-201ENST00000485829 412 ntBASIC3.61□□□□□ -1.83
TNFSF9P41273 HMGB1P21-201ENST00000502313 581 ntBASIC3.61□□□□□ -1.83
TNFSF9P41273 AC020893.1-201ENST00000502452 580 ntBASIC3.61□□□□□ -1.83
TNFSF9P41273 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFSF9P41273 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFSF9P41273 PTP4A1P6-201ENST00000531034 478 ntBASIC3.61□□□□□ -1.83
TNFSF9P41273 POLR2KP1-201ENST00000553226 168 ntBASIC3.61□□□□□ -1.83
TNFSF9P41273 AL109741.3-201ENST00000561748 592 ntBASIC3.61□□□□□ -1.83
TNFSF9P41273 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFSF9P41273 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.61□□□□□ -1.83
TNFSF9P41273 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFSF9P41273 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFSF9P41273 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.61□□□□□ -1.83
TNFSF9P41273 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.61□□□□□ -1.83
TNFSF9P41273 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFSF9P41273 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TNFSF9P41273 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFSF9P41273 MTND4P31-201ENST00000425607 1343 ntBASIC3.61□□□□□ -1.83
TNFSF9P41273 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TNFSF9P41273 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TNFSF9P41273 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
TNFSF9P41273 PNPT1P2-201ENST00000456768 2050 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.6□□□□□ -1.83
TNFSF9P41273 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TNFSF9P41273 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 RFESDP1-201ENST00000422350 461 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.6□□□□□ -1.83
TNFSF9P41273 RPL23AP82-202ENST00000427528 469 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 FO393419.3-201ENST00000428741 282 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 AC091862.1-201ENST00000438016 1100 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 RPL12P26-201ENST00000452430 487 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 CENPBD1P1-201ENST00000464061 469 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 AC012170.1-201ENST00000495139 359 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 AC025459.1-201ENST00000504072 156 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.6□□□□□ -1.83
TNFSF9P41273 AC110792.2-201ENST00000510278 224 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 APOOP4-201ENST00000513530 597 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms