Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 ANP32BP2-201ENST00000454525 545 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 RN7SL303P-201ENST00000469773 251 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 RPS29P19-201ENST00000479709 171 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 RPS26P15-201ENST00000488067 348 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.08□□□□□ -1.76
HNF4AP41235 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.08□□□□□ -1.76
HNF4AP41235 AC117529.2-201ENST00000512159 2068 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 SNORA70.14-201ENST00000516205 110 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.08□□□□□ -1.76
HNF4AP41235 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.08□□□□□ -1.76
HNF4AP41235 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.08□□□□□ -1.76
HNF4AP41235 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.08□□□□□ -1.76
HNF4AP41235 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.08□□□□□ -1.76
HNF4AP41235 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.08□□□□□ -1.76
HNF4AP41235 AC063950.1-201ENST00000552036 308 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HNF4AP41235 PSMB7P1-201ENST00000556349 514 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.08□□□□□ -1.76
HNF4AP41235 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.08□□□□□ -1.76
HNF4AP41235 MIR4284-201ENST00000578924 81 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 AL669831.4-202ENST00000590817 238 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.08□□□□□ -1.76
HNF4AP41235 AL022067.1-201ENST00000602426 454 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 AC099785.1-201ENST00000605697 437 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 AP002802.2-201ENST00000605877 235 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.08□□□□□ -1.76
HNF4AP41235 AL445423.1-201ENST00000609941 536 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.08□□□□□ -1.76
HNF4AP41235 AC068787.1-201ENST00000623908 691 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 AC098679.5-201ENST00000624394 571 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 AC008785.1-201ENST00000624475 456 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 MAPK10-372ENST00000641954 3413 ntBASIC4.08□□□□□ -1.76
HNF4AP41235 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HNF4AP41235 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HNF4AP41235 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.08□□□□□ -1.76
HNF4AP41235 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.07□□□□□ -1.76
HNF4AP41235 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HNF4AP41235 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HNF4AP41235 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.07□□□□□ -1.76
HNF4AP41235 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HNF4AP41235 ZNF29P-201ENST00000225587 168 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 AC126755.2-208ENST00000327792 462 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 AC138969.1-213ENST00000331436 462 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 RPL32P3-201ENST00000359025 275 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 AC234772.1-201ENST00000377927 937 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 RNU6-339P-201ENST00000384310 107 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 RNA5SP56-201ENST00000410277 118 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 JKAMPP1-201ENST00000413804 919 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HNF4AP41235 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.07□□□□□ -1.76
HNF4AP41235 HMGB3P5-201ENST00000428894 612 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.07□□□□□ -1.76
HNF4AP41235 RPL23AP46-201ENST00000438548 490 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.07□□□□□ -1.76
HNF4AP41235 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.07□□□□□ -1.76
HNF4AP41235 SNRPGP3-201ENST00000469405 227 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 NDUFA5P9-201ENST00000472609 340 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 AC006517.1-201ENST00000480485 328 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 RN7SL691P-201ENST00000494487 301 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.07□□□□□ -1.76
HNF4AP41235 KCTD9P2-201ENST00000512203 1013 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 RNA5SP49-201ENST00000516450 115 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 Y_RNA.717-201ENST00000517106 92 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 AP001207.2-201ENST00000519490 539 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 HIGD1AP5-201ENST00000529959 259 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.07□□□□□ -1.76
HNF4AP41235 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.07□□□□□ -1.76
HNF4AP41235 LSM6P2-201ENST00000552208 177 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.07□□□□□ -1.76
HNF4AP41235 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.07□□□□□ -1.76
HNF4AP41235 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.07□□□□□ -1.76
HNF4AP41235 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.07□□□□□ -1.76
HNF4AP41235 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.07□□□□□ -1.76
HNF4AP41235 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.07□□□□□ -1.76
HNF4AP41235 AGGF1P6-201ENST00000569213 976 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.07□□□□□ -1.76
HNF4AP41235 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
HNF4AP41235 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.07□□□□□ -1.76
HNF4AP41235 IPO5P1-202ENST00000600039 287 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 AL355812.1-201ENST00000603215 216 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 AL445435.1-201ENST00000604232 665 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 AP000255.1-201ENST00000610276 676 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 AL354976.1-201ENST00000613843 387 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.07□□□□□ -1.76
HNF4AP41235 AC233309.1-201ENST00000619522 751 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.07□□□□□ -1.76
HNF4AP41235 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.07□□□□□ -1.76
HNF4AP41235 BX649567.1-201ENST00000642071 1134 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HNF4AP41235 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
HNF4AP41235 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HNF4AP41235 AF127577.6-201ENST00000623352 2191 ntBASIC4.07□□□□□ -1.76
HNF4AP41235 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HNF4AP41235 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HNF4AP41235 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.07□□□□□ -1.76
HNF4AP41235 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HNF4AP41235 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.06□□□□□ -1.76
HNF4AP41235 AP001350.1-201ENST00000601906 1524 ntBASIC4.06□□□□□ -1.76
HNF4AP41235 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms