Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AP001086.1-201ENST00000494882 321 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AC110768.1-201ENST00000509222 400 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.37□□□□□ -1.87
RFC3P40938 DUXAP2-201ENST00000519198 589 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC3P40938 OR7E13P-201ENST00000526052 910 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFC3P40938 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC3P40938 CENPUP2-201ENST00000555897 1186 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC3P40938 AC006270.2-201ENST00000578523 652 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.37□□□□□ -1.87
RFC3P40938 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC3P40938 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.37□□□□□ -1.87
RFC3P40938 SRGNP1-201ENST00000603392 451 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AL137849.1-201ENST00000604767 169 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.37□□□□□ -1.87
RFC3P40938 RNU1-30P-201ENST00000606575 163 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AC015802.5-201ENST00000607478 399 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AL450489.1-201ENST00000612071 468 ntBASIC3.37□□□□□ -1.87
RFC3P40938 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.37□□□□□ -1.87
RFC3P40938 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFC3P40938 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFC3P40938 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFC3P40938 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RFC3P40938 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.36□□□□□ -1.87
RFC3P40938 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RFC3P40938 AC090337.1-201ENST00000579651 2074 ntBASIC3.36□□□□□ -1.87
RFC3P40938 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
RFC3P40938 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RFC3P40938 RNU6-1293P-201ENST00000384077 107 ntBASIC3.36□□□□□ -1.87
RFC3P40938 RNU6-356P-201ENST00000384140 107 ntBASIC3.36□□□□□ -1.87
RFC3P40938 RNU6-761P-201ENST00000384148 107 ntBASIC3.36□□□□□ -1.87
RFC3P40938 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFC3P40938 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RFC3P40938 AC069218.2-201ENST00000411665 344 ntBASIC3.36□□□□□ -1.87
RFC3P40938 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.36□□□□□ -1.87
RFC3P40938 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.36□□□□□ -1.87
RFC3P40938 MTND4P24-201ENST00000424002 397 ntBASIC3.36□□□□□ -1.87
RFC3P40938 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.36□□□□□ -1.87
RFC3P40938 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.36□□□□□ -1.87
RFC3P40938 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.36□□□□□ -1.87
RFC3P40938 TRIM60P13-201ENST00000432350 1283 ntBASIC3.36□□□□□ -1.87
RFC3P40938 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.36□□□□□ -1.87
RFC3P40938 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.36□□□□□ -1.87
RFC3P40938 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.36□□□□□ -1.87
RFC3P40938 HMGB1P48-201ENST00000446155 598 ntBASIC3.36□□□□□ -1.87
RFC3P40938 HMGN2P21-201ENST00000447764 270 ntBASIC3.36□□□□□ -1.87
RFC3P40938 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.36□□□□□ -1.87
RFC3P40938 TRBV12-2-201ENST00000489763 344 ntBASIC3.36□□□□□ -1.87
RFC3P40938 AC078817.1-201ENST00000492623 435 ntBASIC3.36□□□□□ -1.87
RFC3P40938 RPL5P23-201ENST00000496040 868 ntBASIC3.36□□□□□ -1.87
RFC3P40938 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.36□□□□□ -1.87
RFC3P40938 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RFC3P40938 PTGES3P3-201ENST00000511479 482 ntBASIC3.36□□□□□ -1.87
RFC3P40938 RN7SKP283-201ENST00000517197 270 ntBASIC3.36□□□□□ -1.87
RFC3P40938 RNU4-60P-201ENST00000517239 135 ntBASIC3.36□□□□□ -1.87
RFC3P40938 OR5AK3P-201ENST00000527486 1297 ntBASIC3.36□□□□□ -1.87
RFC3P40938 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.36□□□□□ -1.87
RFC3P40938 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.36□□□□□ -1.87
RFC3P40938 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.36□□□□□ -1.87
RFC3P40938 AC006960.3-201ENST00000561845 705 ntBASIC3.36□□□□□ -1.87
RFC3P40938 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.36□□□□□ -1.87
RFC3P40938 EIF1P6-201ENST00000600054 334 ntBASIC3.36□□□□□ -1.87
RFC3P40938 AC006254.3-201ENST00000603353 884 ntBASIC3.36□□□□□ -1.87
RFC3P40938 AC010591.1-201ENST00000603941 649 ntBASIC3.36□□□□□ -1.87
RFC3P40938 AL365503.1-201ENST00000605247 905 ntBASIC3.36□□□□□ -1.87
RFC3P40938 AL355802.4-201ENST00000607635 548 ntBASIC3.36□□□□□ -1.87
RFC3P40938 RNU6-156P-201ENST00000621869 107 ntBASIC3.36□□□□□ -1.87
RFC3P40938 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFC3P40938 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.36□□□□□ -1.87
RFC3P40938 AC138649.5-201ENST00000637456 137 ntBASIC3.36□□□□□ -1.87
RFC3P40938 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.36□□□□□ -1.87
RFC3P40938 IPO8P1-201ENST00000455509 3109 ntBASIC3.36□□□□□ -1.87
RFC3P40938 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFC3P40938 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RFC3P40938 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RFC3P40938 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFC3P40938 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFC3P40938 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RFC3P40938 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFC3P40938 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFC3P40938 USP8P1-201ENST00000494673 3183 ntBASIC3.35□□□□□ -1.87
RFC3P40938 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFC3P40938 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFC3P40938 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFC3P40938 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFC3P40938 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFC3P40938 MIR218-2-201ENST00000385006 110 ntBASIC3.35□□□□□ -1.87
RFC3P40938 RNA5SP424-201ENST00000390988 115 ntBASIC3.35□□□□□ -1.87
RFC3P40938 SNORA11.1-201ENST00000408133 129 ntBASIC3.35□□□□□ -1.87
RFC3P40938 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RFC3P40938 ATP5A1P2-201ENST00000412323 255 ntBASIC3.35□□□□□ -1.87
RFC3P40938 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFC3P40938 NUP35P2-201ENST00000416748 943 ntBASIC3.35□□□□□ -1.87
RFC3P40938 AC002075.2-201ENST00000425207 252 ntBASIC3.35□□□□□ -1.87
RFC3P40938 AC073063.1-201ENST00000434352 607 ntBASIC3.35□□□□□ -1.87
RFC3P40938 CYCSP43-201ENST00000438233 310 ntBASIC3.35□□□□□ -1.87
RFC3P40938 AL645931.1-201ENST00000439737 410 ntBASIC3.35□□□□□ -1.87
RFC3P40938 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms