Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.48□□□□□ -1.69
RFC1P35251 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFC1P35251 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFC1P35251 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RFC1P35251 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
RFC1P35251 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RFC1P35251 AL161909.1-201ENST00000397390 712 ntBASIC4.47□□□□□ -1.69
RFC1P35251 RNA5SP36-201ENST00000410197 133 ntBASIC4.47□□□□□ -1.69
RFC1P35251 RN7SKP235-201ENST00000410662 305 ntBASIC4.47□□□□□ -1.69
RFC1P35251 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.47□□□□□ -1.69
RFC1P35251 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.47□□□□□ -1.69
RFC1P35251 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.47□□□□□ -1.69
RFC1P35251 AC090960.1-201ENST00000421072 306 ntBASIC4.47□□□□□ -1.69
RFC1P35251 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.47□□□□□ -1.69
RFC1P35251 USP9YP31-201ENST00000431405 881 ntBASIC4.47□□□□□ -1.69
RFC1P35251 MTND3P1-201ENST00000441336 220 ntBASIC4.47□□□□□ -1.69
RFC1P35251 RPL7P59-201ENST00000447700 943 ntBASIC4.47□□□□□ -1.69
RFC1P35251 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.47□□□□□ -1.69
RFC1P35251 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.47□□□□□ -1.69
RFC1P35251 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.47□□□□□ -1.69
RFC1P35251 S100A11P1-201ENST00000477525 312 ntBASIC4.47□□□□□ -1.69
RFC1P35251 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.47□□□□□ -1.69
RFC1P35251 RN7SL691P-201ENST00000494487 301 ntBASIC4.47□□□□□ -1.69
RFC1P35251 AC083829.1-201ENST00000503756 657 ntBASIC4.47□□□□□ -1.69
RFC1P35251 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.47□□□□□ -1.69
RFC1P35251 AC008885.2-201ENST00000509506 930 ntBASIC4.47□□□□□ -1.69
RFC1P35251 AC079395.1-201ENST00000510981 262 ntBASIC4.47□□□□□ -1.69
RFC1P35251 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.47□□□□□ -1.69
RFC1P35251 RNU6-885P-201ENST00000516607 104 ntBASIC4.47□□□□□ -1.69
RFC1P35251 RNA5SP73-201ENST00000516744 108 ntBASIC4.47□□□□□ -1.69
RFC1P35251 RNA5SP135-201ENST00000517019 125 ntBASIC4.47□□□□□ -1.69
RFC1P35251 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.47□□□□□ -1.69
RFC1P35251 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.47□□□□□ -1.69
RFC1P35251 MTCO1P47-201ENST00000523889 1271 ntBASIC4.47□□□□□ -1.69
RFC1P35251 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFC1P35251 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
RFC1P35251 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.47□□□□□ -1.69
RFC1P35251 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFC1P35251 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.47□□□□□ -1.69
RFC1P35251 HIGD1AP17-201ENST00000554576 276 ntBASIC4.47□□□□□ -1.69
RFC1P35251 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.47□□□□□ -1.69
RFC1P35251 AC090888.1-201ENST00000561335 1141 ntBASIC4.47□□□□□ -1.69
RFC1P35251 AP005136.1-201ENST00000579765 429 ntBASIC4.47□□□□□ -1.69
RFC1P35251 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.47□□□□□ -1.69
RFC1P35251 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.47□□□□□ -1.69
RFC1P35251 AC110760.3-201ENST00000598794 467 ntBASIC4.47□□□□□ -1.69
RFC1P35251 AL031281.1-201ENST00000604049 488 ntBASIC4.47□□□□□ -1.69
RFC1P35251 AL390816.3-201ENST00000604527 1066 ntBASIC4.47□□□□□ -1.69
RFC1P35251 AL158042.1-201ENST00000605338 460 ntBASIC4.47□□□□□ -1.69
RFC1P35251 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.47□□□□□ -1.69
RFC1P35251 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.47□□□□□ -1.69
RFC1P35251 AC099669.2-201ENST00000616549 437 ntBASIC4.47□□□□□ -1.69
RFC1P35251 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.47□□□□□ -1.69
RFC1P35251 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.47□□□□□ -1.69
RFC1P35251 AP000526.1-201ENST00000603308 1388 ntBASIC4.47□□□□□ -1.69
RFC1P35251 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFC1P35251 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFC1P35251 SGO1P2-201ENST00000429458 1589 ntBASIC4.47□□□□□ -1.69
RFC1P35251 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFC1P35251 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.47□□□□□ -1.69
RFC1P35251 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFC1P35251 ZNF542P-204ENST00000482727 1305 ntBASIC4.46□□□□□ -1.69
RFC1P35251 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
RFC1P35251 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.46□□□□□ -1.69
RFC1P35251 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
RFC1P35251 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.46□□□□□ -1.69
RFC1P35251 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.46□□□□□ -1.69
RFC1P35251 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.46□□□□□ -1.7
RFC1P35251 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.46□□□□□ -1.7
RFC1P35251 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
RFC1P35251 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RFC1P35251 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFC1P35251 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
RFC1P35251 RNU1-14P-201ENST00000362759 152 ntBASIC4.46□□□□□ -1.7
RFC1P35251 RNA5SP391-201ENST00000363456 119 ntBASIC4.46□□□□□ -1.7
RFC1P35251 SNORD116-1-201ENST00000384335 95 ntBASIC4.46□□□□□ -1.7
RFC1P35251 SNORD116-23-201ENST00000384645 92 ntBASIC4.46□□□□□ -1.7
RFC1P35251 MIR708-201ENST00000390708 88 ntBASIC4.46□□□□□ -1.7
RFC1P35251 SKINT1L-201ENST00000401057 817 ntBASIC4.46□□□□□ -1.7
RFC1P35251 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.46□□□□□ -1.7
RFC1P35251 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RFC1P35251 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.46□□□□□ -1.7
RFC1P35251 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.46□□□□□ -1.7
RFC1P35251 AC009480.2-201ENST00000422916 432 ntBASIC4.46□□□□□ -1.7
RFC1P35251 AL139421.1-201ENST00000423010 169 ntBASIC4.46□□□□□ -1.7
RFC1P35251 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.46□□□□□ -1.7
RFC1P35251 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.46□□□□□ -1.7
RFC1P35251 AL606662.1-201ENST00000445763 553 ntBASIC4.46□□□□□ -1.7
RFC1P35251 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.46□□□□□ -1.7
RFC1P35251 RNU7-125P-201ENST00000458760 62 ntBASIC4.46□□□□□ -1.7
RFC1P35251 AC011276.1-201ENST00000469688 323 ntBASIC4.46□□□□□ -1.7
RFC1P35251 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.46□□□□□ -1.7
RFC1P35251 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RFC1P35251 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.46□□□□□ -1.7
RFC1P35251 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.46□□□□□ -1.7
RFC1P35251 BNIP3P41-201ENST00000503774 571 ntBASIC4.46□□□□□ -1.7
RFC1P35251 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.46□□□□□ -1.7
RFC1P35251 WBP1LP4-201ENST00000505043 344 ntBASIC4.46□□□□□ -1.7
RFC1P35251 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RFC1P35251 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms