Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TNPO1P3-201ENST00000436471 2662 ntBASIC4.29□□□□□ -1.72
RFC4P35249 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RFC4P35249 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFC4P35249 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RFC4P35249 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.29□□□□□ -1.72
RFC4P35249 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.29□□□□□ -1.72
RFC4P35249 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RFC4P35249 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RFC4P35249 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFC4P35249 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC4P35249 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC4P35249 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC4P35249 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC4P35249 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.28□□□□□ -1.72
RFC4P35249 AL138885.1-201ENST00000405921 675 ntBASIC4.28□□□□□ -1.72
RFC4P35249 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.28□□□□□ -1.72
RFC4P35249 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.28□□□□□ -1.72
RFC4P35249 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC4P35249 AC092832.1-201ENST00000422934 400 ntBASIC4.28□□□□□ -1.72
RFC4P35249 AL158071.1-201ENST00000430315 461 ntBASIC4.28□□□□□ -1.72
RFC4P35249 RPS24P8-201ENST00000431490 402 ntBASIC4.28□□□□□ -1.72
RFC4P35249 AL353093.1-201ENST00000441292 436 ntBASIC4.28□□□□□ -1.72
RFC4P35249 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.28□□□□□ -1.72
RFC4P35249 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC4P35249 HMGB3P14-201ENST00000494195 599 ntBASIC4.28□□□□□ -1.72
RFC4P35249 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC4P35249 AC108120.2-201ENST00000512973 294 ntBASIC4.28□□□□□ -1.72
RFC4P35249 RN7SKP82-201ENST00000516786 223 ntBASIC4.28□□□□□ -1.72
RFC4P35249 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.28□□□□□ -1.72
RFC4P35249 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC4P35249 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.28□□□□□ -1.72
RFC4P35249 AC022080.3-201ENST00000544433 482 ntBASIC4.28□□□□□ -1.72
RFC4P35249 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RFC4P35249 AC106785.3-201ENST00000564064 847 ntBASIC4.28□□□□□ -1.72
RFC4P35249 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC4P35249 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC4P35249 KLKP1-201ENST00000595979 403 ntBASIC4.28□□□□□ -1.72
RFC4P35249 AC079791.1-201ENST00000605356 973 ntBASIC4.28□□□□□ -1.72
RFC4P35249 AC090525.3-201ENST00000605601 189 ntBASIC4.28□□□□□ -1.72
RFC4P35249 AC055764.2-201ENST00000610089 670 ntBASIC4.28□□□□□ -1.72
RFC4P35249 AC009464.1-201ENST00000615731 469 ntBASIC4.28□□□□□ -1.72
RFC4P35249 AL713922.2-201ENST00000619384 716 ntBASIC4.28□□□□□ -1.72
RFC4P35249 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.28□□□□□ -1.72
RFC4P35249 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RFC4P35249 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.28□□□□□ -1.72
RFC4P35249 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
RFC4P35249 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC4P35249 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC4P35249 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RFC4P35249 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC4P35249 RNA5SP197-201ENST00000363357 119 ntBASIC4.27□□□□□ -1.73
RFC4P35249 RNU1-87P-201ENST00000363727 170 ntBASIC4.27□□□□□ -1.73
RFC4P35249 RNU6-819P-201ENST00000364116 107 ntBASIC4.27□□□□□ -1.73
RFC4P35249 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.27□□□□□ -1.73
RFC4P35249 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.27□□□□□ -1.73
RFC4P35249 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC4P35249 RAC1P3-201ENST00000416129 580 ntBASIC4.27□□□□□ -1.73
RFC4P35249 AC093698.1-201ENST00000423843 571 ntBASIC4.27□□□□□ -1.73
RFC4P35249 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.27□□□□□ -1.73
RFC4P35249 ELOCP6-201ENST00000429066 328 ntBASIC4.27□□□□□ -1.73
RFC4P35249 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC4P35249 NDUFA5P10-201ENST00000432147 357 ntBASIC4.27□□□□□ -1.73
RFC4P35249 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RFC4P35249 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.27□□□□□ -1.73
RFC4P35249 CBX1P4-201ENST00000439415 457 ntBASIC4.27□□□□□ -1.73
RFC4P35249 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.27□□□□□ -1.73
RFC4P35249 ELOCP12-201ENST00000458706 328 ntBASIC4.27□□□□□ -1.73
RFC4P35249 RPL7P48-201ENST00000461513 746 ntBASIC4.27□□□□□ -1.73
RFC4P35249 AC109925.1-201ENST00000478069 331 ntBASIC4.27□□□□□ -1.73
RFC4P35249 HMGB1P21-201ENST00000502313 581 ntBASIC4.27□□□□□ -1.73
RFC4P35249 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.27□□□□□ -1.73
RFC4P35249 PTGES3P3-201ENST00000511479 482 ntBASIC4.27□□□□□ -1.73
RFC4P35249 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.27□□□□□ -1.73
RFC4P35249 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.27□□□□□ -1.73
RFC4P35249 AP005205.1-201ENST00000563503 508 ntBASIC4.27□□□□□ -1.73
RFC4P35249 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.27□□□□□ -1.73
RFC4P35249 AC022387.2-201ENST00000604050 448 ntBASIC4.27□□□□□ -1.73
RFC4P35249 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.27□□□□□ -1.73
RFC4P35249 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.27□□□□□ -1.73
RFC4P35249 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFC4P35249 AC004943.3-201ENST00000624116 600 ntBASIC4.27□□□□□ -1.73
RFC4P35249 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.27□□□□□ -1.73
RFC4P35249 OR6C71P-202ENST00000641886 1107 ntBASIC4.27□□□□□ -1.73
RFC4P35249 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RFC4P35249 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC4P35249 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RFC4P35249 AC008725.1-201ENST00000605123 2263 ntBASIC4.26□□□□□ -1.73
RFC4P35249 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFC4P35249 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.26□□□□□ -1.73
RFC4P35249 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFC4P35249 RNA5SP42-201ENST00000364278 115 ntBASIC4.26□□□□□ -1.73
RFC4P35249 RNU1-140P-201ENST00000365040 165 ntBASIC4.26□□□□□ -1.73
RFC4P35249 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.26□□□□□ -1.73
RFC4P35249 RNU6-244P-201ENST00000391028 104 ntBASIC4.26□□□□□ -1.73
RFC4P35249 ARF4P3-201ENST00000397387 509 ntBASIC4.26□□□□□ -1.73
RFC4P35249 UBE2V1P2-201ENST00000397758 440 ntBASIC4.26□□□□□ -1.73
RFC4P35249 AC004552.1-201ENST00000419089 348 ntBASIC4.26□□□□□ -1.73
RFC4P35249 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.26□□□□□ -1.73
RFC4P35249 AC025750.2-201ENST00000442609 450 ntBASIC4.26□□□□□ -1.73
RFC4P35249 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms