Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MT1CP-201ENST00000567054 174 ntBASIC6.46□□□□□ -1.38
VARSP26640 AC115085.1-201ENST00000588924 229 ntBASIC6.46□□□□□ -1.38
VARSP26640 AC011921.2-201ENST00000589465 152 ntBASIC6.46□□□□□ -1.38
VARSP26640 AC006254.3-201ENST00000603353 884 ntBASIC6.46□□□□□ -1.38
VARSP26640 AC020910.3-201ENST00000603701 874 ntBASIC6.46□□□□□ -1.38
VARSP26640 Z98751.3-201ENST00000604447 521 ntBASIC6.46□□□□□ -1.38
VARSP26640 MTND4LP5-201ENST00000605152 292 ntBASIC6.46□□□□□ -1.38
VARSP26640 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.46□□□□□ -1.38
VARSP26640 AL445363.3-201ENST00000623080 671 ntBASIC6.46□□□□□ -1.38
VARSP26640 AC000123.2-201ENST00000623124 461 ntBASIC6.46□□□□□ -1.38
VARSP26640 AC061999.1-201ENST00000624454 177 ntBASIC6.46□□□□□ -1.38
VARSP26640 AC068213.1-201ENST00000625124 226 ntBASIC6.46□□□□□ -1.38
VARSP26640 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.46□□□□□ -1.38
VARSP26640 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VARSP26640 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VARSP26640 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
VARSP26640 BIN2P1-201ENST00000504996 1530 ntBASIC6.45□□□□□ -1.38
VARSP26640 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.45□□□□□ -1.38
VARSP26640 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.45□□□□□ -1.38
VARSP26640 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
VARSP26640 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VARSP26640 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
VARSP26640 AL121768.1-201ENST00000613917 2544 ntBASIC6.45□□□□□ -1.38
VARSP26640 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VARSP26640 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VARSP26640 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.45□□□□□ -1.38
VARSP26640 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VARSP26640 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VARSP26640 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VARSP26640 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
VARSP26640 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
VARSP26640 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
VARSP26640 MIR323B-201ENST00000385269 82 ntBASIC6.45□□□□□ -1.38
VARSP26640 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
VARSP26640 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
VARSP26640 RNA5SP251-201ENST00000410614 137 ntBASIC6.45□□□□□ -1.38
VARSP26640 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.45□□□□□ -1.38
VARSP26640 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.45□□□□□ -1.38
VARSP26640 AL590632.1-201ENST00000424289 371 ntBASIC6.45□□□□□ -1.38
VARSP26640 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.45□□□□□ -1.38
VARSP26640 AC022022.1-201ENST00000430304 178 ntBASIC6.45□□□□□ -1.38
VARSP26640 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VARSP26640 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VARSP26640 AL590399.4-201ENST00000436561 601 ntBASIC6.45□□□□□ -1.38
VARSP26640 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.45□□□□□ -1.38
VARSP26640 AC104332.1-201ENST00000440471 797 ntBASIC6.45□□□□□ -1.38
VARSP26640 AC245291.3-201ENST00000443400 292 ntBASIC6.45□□□□□ -1.38
VARSP26640 RPL21P89-201ENST00000444021 467 ntBASIC6.45□□□□□ -1.38
VARSP26640 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.45□□□□□ -1.38
VARSP26640 AC090686.1-201ENST00000481577 749 ntBASIC6.45□□□□□ -1.38
VARSP26640 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.45□□□□□ -1.38
VARSP26640 AC093878.1-201ENST00000515630 432 ntBASIC6.45□□□□□ -1.38
VARSP26640 OR5D17P-201ENST00000531492 978 ntBASIC6.45□□□□□ -1.38
VARSP26640 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.45□□□□□ -1.38
VARSP26640 AC007068.2-201ENST00000543168 395 ntBASIC6.45□□□□□ -1.38
VARSP26640 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.45□□□□□ -1.38
VARSP26640 AL358913.1-201ENST00000554342 121 ntBASIC6.45□□□□□ -1.38
VARSP26640 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.45□□□□□ -1.38
VARSP26640 MIR212-201ENST00000586026 110 ntBASIC6.45□□□□□ -1.38
VARSP26640 MIR6778-201ENST00000617912 73 ntBASIC6.45□□□□□ -1.38
VARSP26640 MIR6849-201ENST00000618543 69 ntBASIC6.45□□□□□ -1.38
VARSP26640 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.45□□□□□ -1.38
VARSP26640 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VARSP26640 AL731556.1-201ENST00000394628 3711 ntBASIC6.45□□□□□ -1.38
VARSP26640 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
VARSP26640 AC235565.1-201ENST00000456962 1325 ntBASIC6.45□□□□□ -1.38
VARSP26640 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
VARSP26640 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.45□□□□□ -1.38
VARSP26640 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VARSP26640 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.44□□□□□ -1.38
VARSP26640 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
VARSP26640 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.44□□□□□ -1.38
VARSP26640 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
VARSP26640 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.44□□□□□ -1.38
VARSP26640 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 HSPA8P14-201ENST00000552265 1805 ntBASIC6.44□□□□□ -1.38
VARSP26640 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
VARSP26640 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.44□□□□□ -1.38
VARSP26640 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
VARSP26640 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 RNU6-511P-201ENST00000363496 107 ntBASIC6.44□□□□□ -1.38
VARSP26640 Y_RNA.180-201ENST00000363867 113 ntBASIC6.44□□□□□ -1.38
VARSP26640 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 Y_RNA.576-201ENST00000384781 102 ntBASIC6.44□□□□□ -1.38
VARSP26640 UBBP1-201ENST00000392399 473 ntBASIC6.44□□□□□ -1.38
VARSP26640 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.44□□□□□ -1.38
VARSP26640 AL590635.1-201ENST00000406314 586 ntBASIC6.44□□□□□ -1.38
VARSP26640 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.44□□□□□ -1.38
VARSP26640 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VARSP26640 RPL7P46-201ENST00000425129 740 ntBASIC6.44□□□□□ -1.38
VARSP26640 USMG5P1-201ENST00000425964 177 ntBASIC6.44□□□□□ -1.38
VARSP26640 AC092651.1-201ENST00000426110 312 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms