Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NR4A1P22736 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
NR4A1P22736 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NR4A1P22736 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.72□□□□□ -1.65
NR4A1P22736 OR4G11P-202ENST00000642116 1414 ntBASIC4.72□□□□□ -1.65
NR4A1P22736 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.71□□□□□ -1.65
NR4A1P22736 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.71□□□□□ -1.65
NR4A1P22736 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NR4A1P22736 AC023421.1-201ENST00000590535 1785 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NR4A1P22736 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
NR4A1P22736 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NR4A1P22736 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.71□□□□□ -1.66
NR4A1P22736 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NR4A1P22736 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NR4A1P22736 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.71□□□□□ -1.66
NR4A1P22736 RNU6-249P-201ENST00000363016 102 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 RNA5SP335-201ENST00000363817 110 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 RNU6-115P-201ENST00000364310 107 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 Y_RNA.263-201ENST00000364659 114 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NR4A1P22736 Y_RNA.535-201ENST00000384612 99 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NR4A1P22736 AL035079.1-201ENST00000405210 287 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.71□□□□□ -1.66
NR4A1P22736 NUP35P2-201ENST00000416748 943 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 CYCSP10-201ENST00000417973 294 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.71□□□□□ -1.66
NR4A1P22736 MTCO1P20-201ENST00000425366 358 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 RPS24P8-201ENST00000431490 402 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 CFL1P1-202ENST00000432948 411 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AL451074.3-201ENST00000437709 472 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.71□□□□□ -1.66
NR4A1P22736 RPL7AP61-201ENST00000443410 636 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AL031584.1-201ENST00000447169 754 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 GAPDHP17-201ENST00000449858 1001 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AL672138.1-201ENST00000450604 1015 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AL590365.1-201ENST00000450788 243 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC023598.1-201ENST00000472521 361 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 OR2AO1P-201ENST00000476497 403 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 RPL7P39-201ENST00000481157 744 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.71□□□□□ -1.66
NR4A1P22736 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.71□□□□□ -1.66
NR4A1P22736 MTCYBP17-201ENST00000503579 789 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC114981.1-201ENST00000503897 678 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.71□□□□□ -1.66
NR4A1P22736 AC097173.1-201ENST00000505862 819 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC022447.3-201ENST00000506865 495 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC093809.1-201ENST00000509155 340 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.71□□□□□ -1.66
NR4A1P22736 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.71□□□□□ -1.66
NR4A1P22736 MTCO1P35-201ENST00000515270 228 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 COX6B1P6-201ENST00000522347 255 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.71□□□□□ -1.66
NR4A1P22736 AP002373.2-201ENST00000541631 1060 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.71□□□□□ -1.66
NR4A1P22736 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.71□□□□□ -1.66
NR4A1P22736 AL512310.1-201ENST00000548639 172 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.71□□□□□ -1.66
NR4A1P22736 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.71□□□□□ -1.66
NR4A1P22736 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.71□□□□□ -1.66
NR4A1P22736 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.71□□□□□ -1.66
NR4A1P22736 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.71□□□□□ -1.66
NR4A1P22736 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.71□□□□□ -1.66
NR4A1P22736 FKBP1AP1-201ENST00000594588 318 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC005261.5-201ENST00000596280 355 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.71□□□□□ -1.66
NR4A1P22736 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.71□□□□□ -1.66
NR4A1P22736 AC103792.1-201ENST00000603591 919 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NR4A1P22736 AL009028.1-201ENST00000604895 802 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC103710.4-201ENST00000609301 899 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NR4A1P22736 MIR6826-201ENST00000617808 98 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NR4A1P22736 AC112204.3-201ENST00000623822 332 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC068880.5-201ENST00000624331 290 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 ATE1-AS1-202ENST00000636460 506 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 MIR1321-201ENST00000637766 79 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.71□□□□□ -1.66
NR4A1P22736 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NR4A1P22736 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.71□□□□□ -1.66
NR4A1P22736 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NR4A1P22736 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.71□□□□□ -1.66
NR4A1P22736 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.71□□□□□ -1.66
NR4A1P22736 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NR4A1P22736 CASC19-284ENST00000642142 1868 ntBASIC4.71□□□□□ -1.66
NR4A1P22736 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
NR4A1P22736 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NR4A1P22736 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NR4A1P22736 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.7□□□□□ -1.66
NR4A1P22736 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NR4A1P22736 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NR4A1P22736 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NR4A1P22736 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
NR4A1P22736 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NR4A1P22736 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
NR4A1P22736 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NR4A1P22736 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms