Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.01□□□□□ -1.93
ATF1P18846 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.01□□□□□ -1.93
ATF1P18846 HMGN1P11-201ENST00000508668 303 ntBASIC3.01□□□□□ -1.93
ATF1P18846 AC008494.2-201ENST00000514544 370 ntBASIC3.01□□□□□ -1.93
ATF1P18846 HIGD1AP3-201ENST00000515857 278 ntBASIC3.01□□□□□ -1.93
ATF1P18846 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.01□□□□□ -1.93
ATF1P18846 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.01□□□□□ -1.93
ATF1P18846 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.01□□□□□ -1.93
ATF1P18846 HAUS1P3-201ENST00000523909 662 ntBASIC3.01□□□□□ -1.93
ATF1P18846 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.01□□□□□ -1.93
ATF1P18846 MED28P5-201ENST00000528254 438 ntBASIC3.01□□□□□ -1.93
ATF1P18846 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.01□□□□□ -1.93
ATF1P18846 ZNF192P1-203ENST00000565888 810 ntBASIC3.01□□□□□ -1.93
ATF1P18846 AC090751.1-201ENST00000566966 267 ntBASIC3.01□□□□□ -1.93
ATF1P18846 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.01□□□□□ -1.93
ATF1P18846 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.01□□□□□ -1.93
ATF1P18846 AC084036.1-201ENST00000609190 508 ntBASIC3.01□□□□□ -1.93
ATF1P18846 AC099778.2-201ENST00000610904 211 ntBASIC3.01□□□□□ -1.93
ATF1P18846 AC119674.1-207ENST00000641355 633 ntBASIC3.01□□□□□ -1.93
ATF1P18846 AL592494.2-201ENST00000425455 1548 ntBASIC3.01□□□□□ -1.93
ATF1P18846 SRP72P2-201ENST00000344851 1979 ntBASIC3.01□□□□□ -1.93
ATF1P18846 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ATF1P18846 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.01□□□□□ -1.93
ATF1P18846 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
ATF1P18846 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3□□□□□ -1.93
ATF1P18846 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
ATF1P18846 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
ATF1P18846 AP001148.1-201ENST00000624124 2359 ntBASIC3□□□□□ -1.93
ATF1P18846 AC119744.1-201ENST00000454746 1715 ntBASIC3□□□□□ -1.93
ATF1P18846 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3□□□□□ -1.93
ATF1P18846 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ATF1P18846 MIR148B-201ENST00000362252 99 ntBASIC3□□□□□ -1.93
ATF1P18846 SNORD9-201ENST00000362566 104 ntBASIC3□□□□□ -1.93
ATF1P18846 RNA5SP51-201ENST00000364750 119 ntBASIC3□□□□□ -1.93
ATF1P18846 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ATF1P18846 CD2-201ENST00000369477 478 ntTSL 2 BASIC3□□□□□ -1.93
ATF1P18846 U8.11-201ENST00000384699 133 ntBASIC3□□□□□ -1.93
ATF1P18846 U8.12-201ENST00000384701 133 ntBASIC3□□□□□ -1.93
ATF1P18846 MIR1303-201ENST00000408625 86 ntBASIC3□□□□□ -1.93
ATF1P18846 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3□□□□□ -1.93
ATF1P18846 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3□□□□□ -1.93
ATF1P18846 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3□□□□□ -1.93
ATF1P18846 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3□□□□□ -1.93
ATF1P18846 MTND2P16-201ENST00000419987 799 ntBASIC3□□□□□ -1.93
ATF1P18846 OR51AB1P-201ENST00000429046 620 ntBASIC3□□□□□ -1.93
ATF1P18846 MTCO1P43-201ENST00000431831 488 ntBASIC3□□□□□ -1.93
ATF1P18846 HMGB1P45-201ENST00000435986 653 ntBASIC3□□□□□ -1.93
ATF1P18846 H2AFZP6-201ENST00000444403 394 ntBASIC3□□□□□ -1.93
ATF1P18846 U8.18-201ENST00000459285 133 ntBASIC3□□□□□ -1.93
ATF1P18846 RPL23AP67-201ENST00000465341 474 ntBASIC3□□□□□ -1.93
ATF1P18846 NCOR1P1-202ENST00000486162 291 ntBASIC3□□□□□ -1.93
ATF1P18846 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3□□□□□ -1.93
ATF1P18846 AC111193.1-201ENST00000504097 155 ntBASIC3□□□□□ -1.93
ATF1P18846 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3□□□□□ -1.93
ATF1P18846 AC023141.12-201ENST00000512399 199 ntBASIC3□□□□□ -1.93
ATF1P18846 NPM1P41-201ENST00000512920 831 ntBASIC3□□□□□ -1.93
ATF1P18846 RN7SKP244-201ENST00000516513 307 ntBASIC3□□□□□ -1.93
ATF1P18846 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3□□□□□ -1.93
ATF1P18846 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3□□□□□ -1.93
ATF1P18846 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3□□□□□ -1.93
ATF1P18846 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3□□□□□ -1.93
ATF1P18846 AC067852.3-201ENST00000589177 561 ntBASIC3□□□□□ -1.93
ATF1P18846 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3□□□□□ -1.93
ATF1P18846 AC011468.4-201ENST00000603942 409 ntBASIC3□□□□□ -1.93
ATF1P18846 AL391497.1-201ENST00000608671 547 ntBASIC3□□□□□ -1.93
ATF1P18846 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
ATF1P18846 MIR8058-201ENST00000615737 89 ntBASIC3□□□□□ -1.93
ATF1P18846 U4.6-201ENST00000621618 127 ntBASIC3□□□□□ -1.93
ATF1P18846 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ATF1P18846 FAM157B-203ENST00000639350 358 ntBASIC3□□□□□ -1.93
ATF1P18846 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ATF1P18846 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ATF1P18846 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ATF1P18846 AC092326.2-201ENST00000624772 1561 ntBASIC3□□□□□ -1.93
ATF1P18846 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATF1P18846 AC090337.1-201ENST00000579651 2074 ntBASIC2.99□□□□□ -1.93
ATF1P18846 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ATF1P18846 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATF1P18846 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
ATF1P18846 RPL7P26-201ENST00000333817 754 ntBASIC2.99□□□□□ -1.93
ATF1P18846 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ATF1P18846 RNA5SP189-201ENST00000364920 115 ntBASIC2.99□□□□□ -1.93
ATF1P18846 SNORD3H-201ENST00000384486 214 ntBASIC2.99□□□□□ -1.93
ATF1P18846 AL355379.1-201ENST00000405542 640 ntBASIC2.99□□□□□ -1.93
ATF1P18846 ATP5A1P2-201ENST00000412323 255 ntBASIC2.99□□□□□ -1.93
ATF1P18846 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.99□□□□□ -1.93
ATF1P18846 XKRYP4-201ENST00000414395 483 ntBASIC2.99□□□□□ -1.93
ATF1P18846 HMGB3P23-201ENST00000414981 585 ntBASIC2.99□□□□□ -1.93
ATF1P18846 DBIP2-201ENST00000419076 262 ntBASIC2.99□□□□□ -1.93
ATF1P18846 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.99□□□□□ -1.93
ATF1P18846 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.99□□□□□ -1.93
ATF1P18846 AC004975.1-201ENST00000428733 208 ntBASIC2.99□□□□□ -1.93
ATF1P18846 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATF1P18846 B3GNT2P1-201ENST00000434960 952 ntBASIC2.99□□□□□ -1.93
ATF1P18846 RPL7P29-201ENST00000437151 728 ntBASIC2.99□□□□□ -1.93
ATF1P18846 MTCYBP31-201ENST00000438855 1122 ntBASIC2.99□□□□□ -1.93
ATF1P18846 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.99□□□□□ -1.93
ATF1P18846 HMGB3P11-201ENST00000440127 604 ntBASIC2.99□□□□□ -1.93
ATF1P18846 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.99□□□□□ -1.93
ATF1P18846 XKRYP5-201ENST00000449659 483 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms