Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGA1P17096 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HMGA1P17096 SNORA18.3-201ENST00000384122 132 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 RNU6-851P-201ENST00000384565 107 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGA1P17096 MTND6P18-201ENST00000439477 513 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 AC093156.1-201ENST00000440382 670 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGA1P17096 RN7SL442P-201ENST00000473804 320 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGA1P17096 SCGB1D5P-201ENST00000515134 247 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 RN7SKP132-201ENST00000516001 208 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 RNA5SP367-201ENST00000516557 118 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 AC024224.1-201ENST00000538284 609 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMGA1P17096 CYCSP39-201ENST00000565821 309 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 MTCO3P22-201ENST00000603219 784 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 AC015871.2-201ENST00000603605 948 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 AC087468.1-201ENST00000604365 630 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 AL356490.1-201ENST00000623079 479 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 AC096644.4-201ENST00000563417 2912 ntBASIC3.08□□□□□ -1.92
HMGA1P17096 AC107027.3-201ENST00000565095 3473 ntBASIC3.07□□□□□ -1.92
HMGA1P17096 CDC27P2-201ENST00000425026 1922 ntBASIC3.07□□□□□ -1.92
HMGA1P17096 AC107081.3-201ENST00000612715 2034 ntBASIC3.07□□□□□ -1.92
HMGA1P17096 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGA1P17096 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HMGA1P17096 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGA1P17096 AC245291.1-201ENST00000419501 328 ntBASIC3.07□□□□□ -1.92
HMGA1P17096 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGA1P17096 EXTL2P1-201ENST00000446218 416 ntBASIC3.07□□□□□ -1.92
HMGA1P17096 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGA1P17096 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGA1P17096 UBE2DNL-203ENST00000474922 222 ntBASIC3.07□□□□□ -1.92
HMGA1P17096 AC004924.1-201ENST00000480160 781 ntBASIC3.07□□□□□ -1.92
HMGA1P17096 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGA1P17096 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.07□□□□□ -1.92
HMGA1P17096 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGA1P17096 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.07□□□□□ -1.92
HMGA1P17096 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGA1P17096 AC010306.1-201ENST00000523223 1117 ntBASIC3.07□□□□□ -1.92
HMGA1P17096 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGA1P17096 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGA1P17096 GTF3AP2-201ENST00000557014 266 ntBASIC3.07□□□□□ -1.92
HMGA1P17096 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGA1P17096 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGA1P17096 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
HMGA1P17096 AL592494.2-201ENST00000425455 1548 ntBASIC3.07□□□□□ -1.92
HMGA1P17096 SRP72P2-201ENST00000344851 1979 ntBASIC3.07□□□□□ -1.92
HMGA1P17096 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGA1P17096 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGA1P17096 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HMGA1P17096 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HMGA1P17096 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HMGA1P17096 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGA1P17096 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HMGA1P17096 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HMGA1P17096 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HMGA1P17096 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGA1P17096 HMGB3P23-201ENST00000414981 585 ntBASIC3.06□□□□□ -1.92
HMGA1P17096 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HMGA1P17096 AL513175.1-201ENST00000431492 780 ntBASIC3.06□□□□□ -1.92
HMGA1P17096 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGA1P17096 AC000041.1-201ENST00000439655 175 ntBASIC3.06□□□□□ -1.92
HMGA1P17096 ELL2P4-201ENST00000446870 1376 ntBASIC3.06□□□□□ -1.92
HMGA1P17096 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGA1P17096 OR9N1P-201ENST00000491296 333 ntBASIC3.06□□□□□ -1.92
HMGA1P17096 VN1R104P-201ENST00000505115 1009 ntBASIC3.06□□□□□ -1.92
HMGA1P17096 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGA1P17096 RNA5SP356-201ENST00000515972 94 ntBASIC3.06□□□□□ -1.92
HMGA1P17096 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.06□□□□□ -1.92
HMGA1P17096 HMGB3P26-201ENST00000560051 582 ntBASIC3.06□□□□□ -1.92
HMGA1P17096 AC034105.3-201ENST00000565294 442 ntBASIC3.06□□□□□ -1.92
HMGA1P17096 AP000919.1-202ENST00000581139 1264 ntBASIC3.06□□□□□ -1.92
HMGA1P17096 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGA1P17096 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGA1P17096 BMS1P21-201ENST00000634565 365 ntBASIC3.06□□□□□ -1.92
HMGA1P17096 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HMGA1P17096 AL365361.1-201ENST00000566942 3481 ntBASIC3.06□□□□□ -1.92
HMGA1P17096 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HMGA1P17096 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
HMGA1P17096 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HMGA1P17096 U3.6-201ENST00000363622 211 ntBASIC3.05□□□□□ -1.92
HMGA1P17096 Y_RNA.500-201ENST00000384466 111 ntBASIC3.05□□□□□ -1.92
HMGA1P17096 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGA1P17096 RPL21P40-201ENST00000428586 483 ntBASIC3.05□□□□□ -1.92
HMGA1P17096 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGA1P17096 AC005002.1-201ENST00000447458 540 ntBASIC3.05□□□□□ -1.92
HMGA1P17096 MTND6P32-201ENST00000457611 483 ntBASIC3.05□□□□□ -1.92
HMGA1P17096 METTL15P1-201ENST00000481421 1045 ntBASIC3.05□□□□□ -1.92
HMGA1P17096 TXNP6-201ENST00000510190 310 ntBASIC3.05□□□□□ -1.92
HMGA1P17096 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGA1P17096 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HMGA1P17096 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGA1P17096 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.05□□□□□ -1.92
HMGA1P17096 MIR4672-201ENST00000583126 81 ntBASIC3.05□□□□□ -1.92
HMGA1P17096 ELOCP29-201ENST00000588193 334 ntBASIC3.05□□□□□ -1.92
HMGA1P17096 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGA1P17096 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGA1P17096 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGA1P17096 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms