Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 U1.23-201ENST00000610293 146 ntBASIC5.07□□□□□ -1.6
CFTRP13569 RNU1-68P-201ENST00000615382 146 ntBASIC5.07□□□□□ -1.6
CFTRP13569 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CFTRP13569 AC068722.2-201ENST00000618734 544 ntBASIC5.07□□□□□ -1.6
CFTRP13569 U1.39-201ENST00000621562 146 ntBASIC5.07□□□□□ -1.6
CFTRP13569 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CFTRP13569 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CFTRP13569 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CFTRP13569 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.06□□□□□ -1.6
CFTRP13569 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.06□□□□□ -1.6
CFTRP13569 AL121834.1-202ENST00000404494 277 ntBASIC5.06□□□□□ -1.6
CFTRP13569 NIPA2P5-201ENST00000452282 464 ntBASIC5.06□□□□□ -1.6
CFTRP13569 RN7SL371P-201ENST00000578099 267 ntBASIC5.06□□□□□ -1.6
CFTRP13569 AC007318.2-201ENST00000620999 243 ntBASIC5.06□□□□□ -1.6
CFTRP13569 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.06□□□□□ -1.6
CFTRP13569 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.06□□□□□ -1.6
CFTRP13569 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.06□□□□□ -1.6
CFTRP13569 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CFTRP13569 AP002088.1-201ENST00000382740 395 ntBASIC5.05□□□□□ -1.6
CFTRP13569 AC110754.1-201ENST00000399740 601 ntBASIC5.05□□□□□ -1.6
CFTRP13569 RAB28P3-201ENST00000448325 597 ntBASIC5.05□□□□□ -1.6
CFTRP13569 Y_RNA.638-201ENST00000459374 113 ntBASIC5.05□□□□□ -1.6
CFTRP13569 AC107016.2-201ENST00000547968 190 ntBASIC5.05□□□□□ -1.6
CFTRP13569 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC5.05□□□□□ -1.6
CFTRP13569 AC079089.3-201ENST00000603094 673 ntBASIC5.05□□□□□ -1.6
CFTRP13569 AP004607.9-201ENST00000618202 316 ntBASIC5.05□□□□□ -1.6
CFTRP13569 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC5.05□□□□□ -1.6
CFTRP13569 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.04□□□□□ -1.6
CFTRP13569 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CFTRP13569 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC5.04□□□□□ -1.6
CFTRP13569 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.04□□□□□ -1.6
CFTRP13569 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.04□□□□□ -1.6
CFTRP13569 AL136097.1-201ENST00000456945 913 ntBASIC5.04□□□□□ -1.6
CFTRP13569 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.04□□□□□ -1.6
CFTRP13569 AC111000.2-201ENST00000507775 550 ntBASIC5.04□□□□□ -1.6
CFTRP13569 AP002812.4-201ENST00000532139 286 ntBASIC5.04□□□□□ -1.6
CFTRP13569 AP000916.1-201ENST00000533869 835 ntBASIC5.04□□□□□ -1.6
CFTRP13569 HMGN2P47-201ENST00000559378 272 ntBASIC5.04□□□□□ -1.6
CFTRP13569 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.04□□□□□ -1.6
CFTRP13569 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC5.04□□□□□ -1.6
CFTRP13569 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC5.04□□□□□ -1.6
CFTRP13569 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
CFTRP13569 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CFTRP13569 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CFTRP13569 AC015813.6-201ENST00000624409 5808 ntBASIC5.03□□□□□ -1.6
CFTRP13569 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CFTRP13569 RNA5SP31-201ENST00000411144 127 ntBASIC5.03□□□□□ -1.6
CFTRP13569 AC010095.1-201ENST00000443543 144 ntBASIC5.03□□□□□ -1.6
CFTRP13569 RPL7L1P1-201ENST00000448259 785 ntBASIC5.03□□□□□ -1.6
CFTRP13569 TRBV12-1-201ENST00000479785 344 ntBASIC5.03□□□□□ -1.6
CFTRP13569 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.03□□□□□ -1.6
CFTRP13569 AC008549.1-201ENST00000512900 643 ntBASIC5.03□□□□□ -1.6
CFTRP13569 AC109329.2-201ENST00000519658 482 ntBASIC5.03□□□□□ -1.6
CFTRP13569 AC017002.4-201ENST00000604721 1525 ntBASIC5.03□□□□□ -1.6
CFTRP13569 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CFTRP13569 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC5.03□□□□□ -1.6
CFTRP13569 DUTP6-201ENST00000425573 462 ntBASIC5.02□□□□□ -1.61
CFTRP13569 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.02□□□□□ -1.61
CFTRP13569 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.02□□□□□ -1.61
CFTRP13569 ATP5F1P7-201ENST00000567330 760 ntBASIC5.02□□□□□ -1.61
CFTRP13569 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.02□□□□□ -1.61
CFTRP13569 AL365400.2-201ENST00000605604 902 ntBASIC5.02□□□□□ -1.61
CFTRP13569 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CFTRP13569 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CFTRP13569 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
CFTRP13569 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CFTRP13569 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CFTRP13569 MIR887-201ENST00000401258 79 ntBASIC5.01□□□□□ -1.61
CFTRP13569 ARL5AP4-201ENST00000430731 512 ntBASIC5.01□□□□□ -1.61
CFTRP13569 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.01□□□□□ -1.61
CFTRP13569 AP000936.2-201ENST00000447151 681 ntBASIC5.01□□□□□ -1.61
CFTRP13569 UBL5P3-201ENST00000475112 231 ntBASIC5.01□□□□□ -1.61
CFTRP13569 SCGB1D5P-201ENST00000515134 247 ntBASIC5.01□□□□□ -1.61
CFTRP13569 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.01□□□□□ -1.61
CFTRP13569 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.01□□□□□ -1.61
CFTRP13569 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CFTRP13569 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
CFTRP13569 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CFTRP13569 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC5.01□□□□□ -1.61
CFTRP13569 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC5.01□□□□□ -1.61
CFTRP13569 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CFTRP13569 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CFTRP13569 AC107027.3-201ENST00000565095 3473 ntBASIC5.01□□□□□ -1.61
CFTRP13569 RNA5SP21-201ENST00000410917 96 ntBASIC5□□□□□ -1.61
CFTRP13569 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5□□□□□ -1.61
CFTRP13569 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5□□□□□ -1.61
CFTRP13569 AC117522.3-201ENST00000507974 584 ntBASIC5□□□□□ -1.61
CFTRP13569 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5□□□□□ -1.61
CFTRP13569 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
CFTRP13569 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC5□□□□□ -1.61
CFTRP13569 HMGB1P50-201ENST00000605814 607 ntBASIC5□□□□□ -1.61
CFTRP13569 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5□□□□□ -1.61
CFTRP13569 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5□□□□□ -1.61
CFTRP13569 MAPK10-362ENST00000641864 4484 ntBASIC5□□□□□ -1.61
CFTRP13569 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5□□□□□ -1.61
CFTRP13569 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5□□□□□ -1.61
CFTRP13569 RNU6-55P-201ENST00000411092 107 ntBASIC5□□□□□ -1.61
CFTRP13569 RNU6-954P-201ENST00000411355 107 ntBASIC5□□□□□ -1.61
CFTRP13569 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC5□□□□□ -1.61
CFTRP13569 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms