Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SEPT2P1-201ENST00000419651 180 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.54□□□□□ -1.68
HOXC6P09630 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC6P09630 COX7BP2-201ENST00000437976 242 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 AC118469.1-201ENST00000442943 488 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 MTND2P4-201ENST00000445034 1004 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 RPL34P26-201ENST00000445636 354 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 MTND1P29-201ENST00000448112 647 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 AL451050.1-201ENST00000450126 415 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC6P09630 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC6P09630 AC073387.1-201ENST00000453261 709 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 RNU7-125P-201ENST00000458760 62 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 RAP1BP2-201ENST00000478270 544 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC6P09630 AC008565.1-201ENST00000509046 885 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC6P09630 MTCO3P15-201ENST00000526563 574 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.54□□□□□ -1.68
HOXC6P09630 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXC6P09630 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC6P09630 AL049870.4-201ENST00000555741 486 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 AC090695.1-201ENST00000561269 1222 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 AC090888.1-201ENST00000561335 1141 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC6P09630 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC6P09630 AC017100.2-201ENST00000584628 355 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC6P09630 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC6P09630 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC6P09630 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC6P09630 AC090425.2-201ENST00000608818 501 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC6P09630 VIS1.1-201ENST00000610517 203 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 AL391261.4-201ENST00000616012 481 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC6P09630 AC007490.1-201ENST00000624321 703 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 AL034408.1-202ENST00000636088 415 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC6P09630 AC021755.1-201ENST00000559747 1447 ntBASIC4.54□□□□□ -1.68
HOXC6P09630 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC6P09630 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC6P09630 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC6P09630 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
HOXC6P09630 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC6P09630 DDX18P4-201ENST00000511690 1966 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HOXC6P09630 RNU1-87P-201ENST00000363727 170 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 RNU4-7P-201ENST00000364758 141 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HOXC6P09630 SNORD116-9-201ENST00000384000 95 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 SNORD116-3-201ENST00000384287 95 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 SNORD116-7-201ENST00000384404 95 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 SNORD116-5-201ENST00000384462 95 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 RPL21P17-201ENST00000397467 475 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC6P09630 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 RPS23P10-201ENST00000416185 486 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC6P09630 PDSS1P1-201ENST00000422953 1114 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 RPF2P1-201ENST00000424137 906 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC6P09630 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC6P09630 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC6P09630 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC6P09630 AL592437.1-201ENST00000443781 492 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 AC092685.1-201ENST00000447960 1243 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 NPM1P13-201ENST00000452663 865 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 AL035407.2-201ENST00000454090 378 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC6P09630 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.53□□□□□ -1.68
HOXC6P09630 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC6P09630 AC108120.2-201ENST00000512973 294 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 FABP5P12-201ENST00000515543 389 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 RNA5SP179-201ENST00000517284 121 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.53□□□□□ -1.68
HOXC6P09630 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC6P09630 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC6P09630 AP003461.1-201ENST00000528866 78 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 PDCL2P2-201ENST00000533651 189 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC6P09630 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC6P09630 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC6P09630 RPL23AP87-202ENST00000573039 466 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 AC068790.2-201ENST00000602601 557 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 SRGNP1-201ENST00000603392 451 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 AC091167.4-201ENST00000605079 184 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 OR2BH1P-201ENST00000608850 864 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC6P09630 AC064801.1-201ENST00000612025 407 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 AL450489.1-201ENST00000612071 468 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 AC005344.1-201ENST00000613391 459 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 FRG1HP-204ENST00000617940 757 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 AL603755.1-201ENST00000619504 163 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 AC026585.1-201ENST00000619582 524 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 AC012314.7-201ENST00000619693 93 ntBASIC4.53□□□□□ -1.68
HOXC6P09630 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms