Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RNU4-26P-201ENST00000410270 107 ntBASIC1.36□□□□□ -2.19
USH2AO75445 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 ARL5AP4-201ENST00000430731 512 ntBASIC1.36□□□□□ -2.19
USH2AO75445 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
USH2AO75445 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.36□□□□□ -2.19
USH2AO75445 AC099489.2-201ENST00000574976 260 ntBASIC1.36□□□□□ -2.19
USH2AO75445 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC1.36□□□□□ -2.19
USH2AO75445 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.36□□□□□ -2.19
USH2AO75445 AC022149.2-201ENST00000621061 203 ntBASIC1.36□□□□□ -2.19
USH2AO75445 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC1.36□□□□□ -2.19
USH2AO75445 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC1.36□□□□□ -2.19
USH2AO75445 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 NCOA4P2-201ENST00000340589 1813 ntBASIC1.36□□□□□ -2.19
USH2AO75445 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
USH2AO75445 RNU6-1159P-201ENST00000362933 107 ntBASIC1.36□□□□□ -2.19
USH2AO75445 IGKV1OR9-2-201ENST00000431378 277 ntBASIC1.36□□□□□ -2.19
USH2AO75445 SKP1P1-201ENST00000438081 489 ntBASIC1.36□□□□□ -2.19
USH2AO75445 SNRPGP9-201ENST00000456025 225 ntBASIC1.36□□□□□ -2.19
USH2AO75445 FCF1P3-201ENST00000496394 590 ntBASIC1.36□□□□□ -2.19
USH2AO75445 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.36□□□□□ -2.19
USH2AO75445 RN7SL622P-201ENST00000585292 275 ntBASIC1.36□□□□□ -2.19
USH2AO75445 AC126118.1-201ENST00000607744 628 ntBASIC1.36□□□□□ -2.19
USH2AO75445 AC107871.2-201ENST00000612894 502 ntBASIC1.36□□□□□ -2.19
USH2AO75445 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC1.36□□□□□ -2.19
USH2AO75445 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC1.36□□□□□ -2.19
USH2AO75445 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC1.36□□□□□ -2.19
USH2AO75445 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 AC007496.3-201ENST00000624987 3443 ntBASIC1.36□□□□□ -2.19
USH2AO75445 RNU6-14P-201ENST00000384630 106 ntBASIC1.36□□□□□ -2.19
USH2AO75445 SNORA64-201ENST00000384674 134 ntBASIC1.36□□□□□ -2.19
USH2AO75445 SNORA80E-201ENST00000384744 137 ntBASIC1.36□□□□□ -2.19
USH2AO75445 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC1.36□□□□□ -2.19
USH2AO75445 SNORA70.19-201ENST00000516717 90 ntBASIC1.36□□□□□ -2.19
USH2AO75445 RN7SKP116-201ENST00000516902 319 ntBASIC1.36□□□□□ -2.19
USH2AO75445 AP005136.1-201ENST00000579765 429 ntBASIC1.36□□□□□ -2.19
USH2AO75445 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
USH2AO75445 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
USH2AO75445 DLD-204ENST00000437604 1859 ntTSL 2 BASIC1.36□□□□□ -2.19
USH2AO75445 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
USH2AO75445 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC1.35□□□□□ -2.19
USH2AO75445 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC1.35□□□□□ -2.19
USH2AO75445 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 AC074367.1-201ENST00000438685 1125 ntBASIC1.35□□□□□ -2.19
USH2AO75445 AC112653.1-201ENST00000443851 386 ntBASIC1.35□□□□□ -2.19
USH2AO75445 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC1.35□□□□□ -2.19
USH2AO75445 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
USH2AO75445 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.35□□□□□ -2.19
USH2AO75445 MIR4472-2-201ENST00000582069 67 ntBASIC1.35□□□□□ -2.19
USH2AO75445 AC020914.4-201ENST00000597690 277 ntBASIC1.35□□□□□ -2.19
USH2AO75445 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.35□□□□□ -2.19
USH2AO75445 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 AC117529.2-201ENST00000512159 2068 ntBASIC1.35□□□□□ -2.19
USH2AO75445 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 PHACTR2P1-201ENST00000605639 1414 ntBASIC1.35□□□□□ -2.19
USH2AO75445 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
USH2AO75445 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 HMGN2P27-201ENST00000427352 270 ntBASIC1.35□□□□□ -2.19
USH2AO75445 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 RPL7L1P1-201ENST00000448259 785 ntBASIC1.35□□□□□ -2.19
USH2AO75445 RPL7P52-201ENST00000449200 742 ntBASIC1.35□□□□□ -2.19
USH2AO75445 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.35□□□□□ -2.19
USH2AO75445 ELOCP23-201ENST00000452014 332 ntBASIC1.35□□□□□ -2.19
USH2AO75445 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC1.35□□□□□ -2.19
USH2AO75445 RPL23AP70-201ENST00000483361 460 ntBASIC1.35□□□□□ -2.19
USH2AO75445 AC015917.1-201ENST00000579654 510 ntBASIC1.35□□□□□ -2.19
USH2AO75445 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 AL392112.1-201ENST00000605115 829 ntBASIC1.35□□□□□ -2.19
USH2AO75445 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 MIR622-201ENST00000638396 96 ntBASIC1.35□□□□□ -2.19
USH2AO75445 AC083837.1-201ENST00000565297 2994 ntBASIC1.35□□□□□ -2.19
USH2AO75445 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 SNORD114-1-201ENST00000362705 72 ntBASIC1.35□□□□□ -2.19
USH2AO75445 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
USH2AO75445 RNA5SP187-201ENST00000384400 119 ntBASIC1.35□□□□□ -2.19
USH2AO75445 AC012065.2-201ENST00000421295 375 ntBASIC1.35□□□□□ -2.19
USH2AO75445 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC1.35□□□□□ -2.19
USH2AO75445 HMGN2P3-201ENST00000433603 273 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms