Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS4BO75351 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS4BO75351 SDAD1P1-202ENST00000524156 2051 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS4BO75351 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS4BO75351 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VPS4BO75351 RNU6-657P-201ENST00000383904 107 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 RNU6-1215P-201ENST00000384441 102 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 SNORA70.10-201ENST00000384515 134 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS4BO75351 AL592291.1-201ENST00000403830 352 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 RNU2-28P-201ENST00000410457 189 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.78□□□□□ -1.64
VPS4BO75351 OR2AM1P-201ENST00000422137 422 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VPS4BO75351 DDX39BP1-205ENST00000422507 192 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS4BO75351 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 IPMKP1-201ENST00000425988 855 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS4BO75351 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS4BO75351 MTCO1P48-201ENST00000448024 1096 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC097493.1-201ENST00000463958 372 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 SRRM1P2-201ENST00000464531 1192 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AC108751.2-201ENST00000469993 231 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC096751.1-202ENST00000502691 1067 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AC010350.1-201ENST00000504908 231 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 MTND2P33-201ENST00000506452 1031 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AC010460.1-201ENST00000507087 466 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS4BO75351 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS4BO75351 AL139174.1-201ENST00000531489 886 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS4BO75351 AC008033.2-201ENST00000542626 177 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VPS4BO75351 NMNAT1P1-201ENST00000554095 876 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS4BO75351 EIF5A2P1-201ENST00000564027 460 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS4BO75351 SNORD39.3-201ENST00000584451 71 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS4BO75351 AP000403.1-201ENST00000603349 851 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AC123786.2-201ENST00000603459 275 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AL357080.1-201ENST00000617394 239 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AL356596.1-201ENST00000624230 379 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS4BO75351 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC107081.3-201ENST00000612715 2034 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 MTCO1P14-201ENST00000441695 1559 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 AC104118.1-201ENST00000607625 1589 ntBASIC4.78□□□□□ -1.64
VPS4BO75351 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
VPS4BO75351 AC126323.6-202ENST00000568092 3511 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS4BO75351 NEAT1-202ENST00000501122 22743 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS4BO75351 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS4BO75351 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS4BO75351 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
VPS4BO75351 XPOTP1-201ENST00000443317 2398 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS4BO75351 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS4BO75351 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
VPS4BO75351 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS4BO75351 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS4BO75351 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS4BO75351 RPL32P3-201ENST00000359025 275 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 RNU6-517P-201ENST00000384362 110 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 MIR23A-201ENST00000385245 73 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 U3.35-201ENST00000408405 208 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 RAD23BP2-201ENST00000416003 1207 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 CHEK2P3-201ENST00000416118 248 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 AC009302.1-201ENST00000417147 390 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS4BO75351 RPL17P36-201ENST00000420302 549 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 AC009965.2-201ENST00000425328 970 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 ZYG11AP1-201ENST00000430329 837 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS4BO75351 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS4BO75351 OR7E125P-201ENST00000443450 846 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 EEF1E1P1-201ENST00000446998 430 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS4BO75351 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS4BO75351 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS4BO75351 AC093899.1-201ENST00000457984 376 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 AC006511.1-201ENST00000470614 315 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms