Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ISCA1P2-201ENST00000438679 421 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AL450023.3-201ENST00000440592 271 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM38O00635 RPL23AP16-201ENST00000441715 421 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AL360221.1-201ENST00000445989 335 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM38O00635 AC092754.2-201ENST00000463506 460 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 SRRM1P2-201ENST00000464531 1192 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AC026979.1-201ENST00000492525 396 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AC080014.1-201ENST00000496877 1201 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 SETP14-201ENST00000497538 873 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 RNF138P1-201ENST00000502765 546 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM38O00635 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM38O00635 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM38O00635 ZNF705CP-201ENST00000530515 889 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AC007115.1-201ENST00000546853 234 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM38O00635 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM38O00635 LSM6P2-201ENST00000552208 177 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM38O00635 AL389895.1-201ENST00000554127 252 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AC008015.1-201ENST00000555505 465 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.78□□□□□ -1.64
TRIM38O00635 SNORD39.3-201ENST00000584451 71 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AC078795.2-201ENST00000602835 1252 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AC007497.1-201ENST00000610421 561 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AC092794.1-201ENST00000612734 582 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 AL359314.1-201ENST00000616913 261 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM38O00635 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRIM38O00635 AC091965.5-201ENST00000624785 342 ntBASIC4.78□□□□□ -1.64
TRIM38O00635 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM38O00635 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM38O00635 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TRIM38O00635 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM38O00635 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM38O00635 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM38O00635 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM38O00635 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM38O00635 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM38O00635 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM38O00635 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM38O00635 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM38O00635 LINC01355-201ENST00000566551 5444 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM38O00635 AL359922.3-201ENST00000624779 1670 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM38O00635 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.77□□□□□ -1.65
TRIM38O00635 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TRIM38O00635 NCLP2-201ENST00000416078 1462 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM38O00635 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM38O00635 AL590240.1-201ENST00000334118 313 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 SNORA73.1-201ENST00000363107 205 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 RNU5E-4P-201ENST00000364931 120 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM38O00635 AC068538.1-201ENST00000376856 336 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 RSL24D1P4-201ENST00000400938 484 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 SSXP10-201ENST00000402595 565 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 RNU2-28P-201ENST00000410457 189 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AC069218.2-201ENST00000411665 344 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 RAP1BP1-201ENST00000412709 553 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM38O00635 TBCAP2-201ENST00000416175 326 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.77□□□□□ -1.65
TRIM38O00635 RPS15AP40-201ENST00000419621 391 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 PTP4A1P5-201ENST00000420305 455 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 E2F6P2-201ENST00000420708 748 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 FABP7P1-201ENST00000424004 391 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 CENPIP1-201ENST00000425713 902 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 OR4F13P-201ENST00000428478 931 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM38O00635 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM38O00635 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM38O00635 AC104978.1-201ENST00000449387 391 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 SLC31A1P1-201ENST00000451221 567 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 CEACAMP6-201ENST00000452007 574 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 TRBV26-201ENST00000456572 344 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 RPS17P2-201ENST00000461663 408 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AC010301.1-201ENST00000473936 355 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM38O00635 AK3P4-201ENST00000504283 583 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 RPF2P2-201ENST00000504693 896 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM38O00635 LTV1P1-201ENST00000510683 1237 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 HMGB1P19-201ENST00000517578 577 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM38O00635 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM38O00635 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.77□□□□□ -1.65
TRIM38O00635 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM38O00635 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM38O00635 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM38O00635 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM38O00635 AC083760.1-201ENST00000589621 670 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM38O00635 AP000811.1-201ENST00000603803 651 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 AC069304.2-201ENST00000605154 435 ntBASIC4.77□□□□□ -1.65
TRIM38O00635 HSPE1P14-201ENST00000605812 302 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms