Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC006111.3-201ENST00000622137 383 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 IPO5-229ENST00000631030 192 ntTSL 5 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 MIR4496-201ENST00000635896 61 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 METTL8-218ENST00000638989 876 ntTSL 5 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 METTL8-219ENST00000640734 726 ntTSL 2 BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 AC032011.1-201ENST00000611703 1549 ntBASIC1.76□□□□□ -2.13
CHKB-CPT1BH3BT56 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 MIR383-201ENST00000362257 73 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 MIR144-201ENST00000384886 86 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AL031985.1-201ENST00000392713 418 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 DNAJC19P6-201ENST00000401853 280 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 BTBD10P2-201ENST00000404779 676 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 SNORA11.3-201ENST00000408471 128 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 RNA5SP274-201ENST00000410484 108 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 RNU4-6P-201ENST00000410804 122 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 RNU2-25P-201ENST00000411041 191 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 RPS26P13-201ENST00000419030 330 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 EIF2S2P3-201ENST00000428356 999 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 UBE2V1P6-201ENST00000430840 422 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 Z74696.2-201ENST00000436514 498 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 RPS26P56-201ENST00000444468 240 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AC009961.3-201ENST00000449832 765 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AP002345.1-201ENST00000456493 928 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 snoU13.1-201ENST00000459157 104 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 NDUFA5P5-201ENST00000468361 342 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 ACTR3P3-201ENST00000480448 893 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 DSTNP2-201ENST00000504533 515 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 OR5M14P-201ENST00000506803 618 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 TBCAP3-201ENST00000512475 312 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 RN7SKP277-201ENST00000516895 283 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AC109635.4-202ENST00000531666 412 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AC107016.2-201ENST00000547968 190 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 PCNPP1-201ENST00000552501 511 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AC105036.1-201ENST00000566222 271 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AC009163.5-201ENST00000575421 637 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AL162274.2-201ENST00000614406 332 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 SNORA11.6-201ENST00000619030 128 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AC006042.3-201ENST00000454684 1469 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 MTND5P24-201ENST00000438892 1767 ntBASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.75□□□□□ -2.13
CHKB-CPT1BH3BT56 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 ZNF807-201ENST00000328088 1707 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 U8.4-201ENST00000363626 134 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 RNA5SP242-201ENST00000364171 118 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 RNU6-1180P-201ENST00000364935 107 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 MIR765-201ENST00000390226 114 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 ENSAP1-201ENST00000392855 326 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 VN1R12P-201ENST00000403778 876 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 Z99755.1-201ENST00000414048 380 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 HMGN1P2-201ENST00000445197 310 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 EIF4EBP2P1-201ENST00000450009 343 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 RN7SL354P-201ENST00000469282 294 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 RN7SL177P-201ENST00000476596 299 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC017015.1-201ENST00000477387 286 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 RPL9P33-201ENST00000484311 566 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC108475.1-201ENST00000507880 950 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 MTATP6P1-201ENST00000514057 681 ntBASIC1.74□□□□□ -2.13
CHKB-CPT1BH3BT56 RPPH1-2P-201ENST00000516688 293 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms