Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RCCD1A6NED2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
RCCD1A6NED2 AC004014.2-201ENST00000623718 5122 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RCCD1A6NED2 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 XIAPP3-201ENST00000312918 795 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 RNU6-434P-201ENST00000384376 107 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 Y_RNA.518-201ENST00000384552 113 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 MIR187-201ENST00000385062 109 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 RPL12P23-201ENST00000405880 490 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 RN7SKP126-201ENST00000411143 300 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 ELOCP20-201ENST00000422460 345 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RCCD1A6NED2 AC097713.2-201ENST00000430199 356 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 GAPDHP20-201ENST00000444107 1007 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 NOP56P2-201ENST00000447491 769 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 AC117503.1-201ENST00000472241 394 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 AC025271.1-201ENST00000485045 429 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 AC011005.2-201ENST00000487324 359 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 AC022206.1-201ENST00000495947 347 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 RN7SL101P-201ENST00000496350 279 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 SNORA25.11-201ENST00000515935 105 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 RNA5SP116-201ENST00000516132 98 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RCCD1A6NED2 MIR3189-201ENST00000578735 73 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 MIR5188-201ENST00000583467 113 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RCCD1A6NED2 AC027506.1-201ENST00000621395 198 ntBASIC6.86□□□□□ -1.31
RCCD1A6NED2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RCCD1A6NED2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RCCD1A6NED2 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RCCD1A6NED2 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RCCD1A6NED2 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RCCD1A6NED2 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
RCCD1A6NED2 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
RCCD1A6NED2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RCCD1A6NED2 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RCCD1A6NED2 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 Y_RNA.126-201ENST00000363382 111 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 SNORD82-201ENST00000365530 70 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 RNU6-214P-201ENST00000384130 107 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 Y_RNA.551-201ENST00000384661 102 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 MIR27A-201ENST00000385073 78 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 AP000580.1-201ENST00000404439 358 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 RN7SKP91-201ENST00000410852 288 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 AL929472.1-201ENST00000417484 429 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 AC005094.1-201ENST00000440420 368 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 RPS10P28-201ENST00000480396 498 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 RPL7L1P7-201ENST00000509986 724 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 GAPDHP62-201ENST00000515313 990 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RCCD1A6NED2 RN7SKP92-201ENST00000517266 244 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 AC060775.1-201ENST00000518241 520 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 CYCSP27-201ENST00000527643 293 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 RN7SL426P-201ENST00000579106 295 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 MIR5010-201ENST00000582846 120 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 MIR4293-201ENST00000584305 78 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 AC104687.2-201ENST00000604442 342 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 AC008162.1-201ENST00000604718 254 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 AL670379.4-201ENST00000605279 254 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 AL121985.3-201ENST00000620690 523 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 AL162377.2-201ENST00000624532 337 ntBASIC6.85□□□□□ -1.31
RCCD1A6NED2 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RCCD1A6NED2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RCCD1A6NED2 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RCCD1A6NED2 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RCCD1A6NED2 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RCCD1A6NED2 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms