Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.65□□□□□ -1.66
SHANK2Q9UPX8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.65□□□□□ -1.66
SHANK2Q9UPX8 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.65□□□□□ -1.66
SHANK2Q9UPX8 H3F3AP1-201ENST00000559984 334 ntBASIC4.65□□□□□ -1.66
SHANK2Q9UPX8 AL008729.2-201ENST00000606393 473 ntBASIC4.65□□□□□ -1.66
SHANK2Q9UPX8 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.65□□□□□ -1.67
SHANK2Q9UPX8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SHANK2Q9UPX8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SHANK2Q9UPX8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
SHANK2Q9UPX8 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.64□□□□□ -1.67
SHANK2Q9UPX8 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.64□□□□□ -1.67
SHANK2Q9UPX8 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.64□□□□□ -1.67
SHANK2Q9UPX8 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.64□□□□□ -1.67
SHANK2Q9UPX8 TGIF1P1-201ENST00000558095 802 ntBASIC4.64□□□□□ -1.67
SHANK2Q9UPX8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.64□□□□□ -1.67
SHANK2Q9UPX8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.64□□□□□ -1.67
SHANK2Q9UPX8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHANK2Q9UPX8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SHANK2Q9UPX8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHANK2Q9UPX8 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 RNA5SP184-201ENST00000411071 108 ntBASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 RPL6P21-201ENST00000418672 846 ntBASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 AC105272.1-201ENST00000438604 198 ntBASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 AC141257.3-201ENST00000572906 215 ntBASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 RMST_8.1-201ENST00000610287 165 ntBASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHANK2Q9UPX8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 RPS4XP8-201ENST00000402039 771 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 ISCA1P2-201ENST00000438679 421 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 AL135938.1-201ENST00000443141 297 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 AC010095.1-201ENST00000443543 144 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 RPL7P36-201ENST00000444633 681 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 RAB28P3-201ENST00000448325 597 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 RN7SKP132-201ENST00000516001 208 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 AC090281.1-201ENST00000523019 276 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 MIR7843-201ENST00000622274 79 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 LINC01355-201ENST00000566551 5444 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 NPM1P11-201ENST00000417106 855 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 HMGB3P11-201ENST00000440127 604 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 AC009263.1-201ENST00000441193 1239 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 AC108938.1-201ENST00000451204 136 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 RPS4XP13-201ENST00000483219 789 ntBASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.62□□□□□ -1.67
SHANK2Q9UPX8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 AL031985.3-201ENST00000565390 2449 ntBASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 OR52B1P-201ENST00000316506 909 ntBASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 RN7SKP222-201ENST00000410651 315 ntBASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 EEF1A1P41-201ENST00000414667 207 ntBASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 AL109933.2-201ENST00000452651 260 ntBASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 HMGN2P7-201ENST00000456186 273 ntBASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 ELOCP29-201ENST00000588193 334 ntBASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.61□□□□□ -1.67
SHANK2Q9UPX8 MTCO1P8-201ENST00000416914 1523 ntBASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 OR1S2-201ENST00000302592 978 ntBASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 SNORA71.1-201ENST00000364523 117 ntBASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 RPL21P112-201ENST00000434403 463 ntBASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 AC108734.1-201ENST00000439549 399 ntBASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 AC105918.1-201ENST00000474399 838 ntBASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 TRBV12-1-201ENST00000479785 344 ntBASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 MIR4524B-201ENST00000581569 115 ntBASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 ATP1B3P1-201ENST00000605365 821 ntBASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHANK2Q9UPX8 AC012020.1-201ENST00000624541 1728 ntBASIC4.59□□□□□ -1.67
SHANK2Q9UPX8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
SHANK2Q9UPX8 AL031679.1-201ENST00000400616 525 ntBASIC4.59□□□□□ -1.67
SHANK2Q9UPX8 RPL30P2-201ENST00000414021 291 ntBASIC4.59□□□□□ -1.67
SHANK2Q9UPX8 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.59□□□□□ -1.67
SHANK2Q9UPX8 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.59□□□□□ -1.67
SHANK2Q9UPX8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHANK2Q9UPX8 AL451142.2-201ENST00000429076 2090 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms