Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 MIR4433B-201ENST00000581329 102 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 AL139099.4-201ENST00000614802 114 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 AC015799.1-201ENST00000622996 3122 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 AL049641.1-201ENST00000441055 1948 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 SEC63P2-201ENST00000503863 1939 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 RNA5SP211-201ENST00000365516 117 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 RPL31P52-201ENST00000407532 367 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 Y_RNA.615-201ENST00000410769 117 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 RPS27AP6-201ENST00000427962 448 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 NPM1P34-201ENST00000428821 893 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 AC109583.1-201ENST00000432156 268 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 CBX1P1-201ENST00000440184 427 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 AL606490.1-201ENST00000452266 765 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 RN7SL727P-201ENST00000482164 296 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 RN7SL30P-201ENST00000488416 306 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 AC126615.2-201ENST00000553003 515 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 MIR4260-201ENST00000583107 67 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 AC145423.1-201ENST00000605712 336 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 AL161734.1-201ENST00000609720 557 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 AC078899.5-201ENST00000612475 178 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 AC087516.1-201ENST00000561236 2428 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 MSL3P1-202ENST00000440028 1468 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 AL442128.2-201ENST00000620246 1824 ntBASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDZRN3Q9UPQ7 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 PARP4P2-201ENST00000446672 3326 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 RNU6-472P-201ENST00000384299 107 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 RNU6-125P-201ENST00000384505 107 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 DPPA2P3-201ENST00000411853 655 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 RPL37P10-201ENST00000412884 288 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AL590135.1-201ENST00000422215 156 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AC005033.1-201ENST00000428904 813 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 EEF1B2P6-201ENST00000445713 673 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AC002553.2-201ENST00000453217 340 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AC099563.1-201ENST00000456086 418 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 Y_RNA.653-201ENST00000459091 95 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AC104164.1-201ENST00000460282 590 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AC008562.1-201ENST00000521763 330 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AC009117.1-201ENST00000563948 554 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AC090312.2-201ENST00000582687 378 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 CKS1BP3-201ENST00000600888 237 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AC010201.1-201ENST00000605051 540 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AC092650.2-201ENST00000619984 902 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms