Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 AC103881.1-201ENST00000603476 538 ntBASIC3.94□□□□□ -1.78
SCN11AQ9UI33 BNIP3P10-201ENST00000605360 577 ntBASIC3.94□□□□□ -1.78
SCN11AQ9UI33 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 RPL5P18-201ENST00000406671 891 ntBASIC3.93□□□□□ -1.78
SCN11AQ9UI33 RPL23AP48-201ENST00000406913 488 ntBASIC3.93□□□□□ -1.78
SCN11AQ9UI33 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 SETP5-201ENST00000437270 562 ntBASIC3.93□□□□□ -1.78
SCN11AQ9UI33 AC093156.1-201ENST00000440382 670 ntBASIC3.93□□□□□ -1.78
SCN11AQ9UI33 HMGB1P3-201ENST00000502802 616 ntBASIC3.93□□□□□ -1.78
SCN11AQ9UI33 VN1R104P-201ENST00000505115 1009 ntBASIC3.93□□□□□ -1.78
SCN11AQ9UI33 GOLGA5P1-201ENST00000507317 980 ntBASIC3.93□□□□□ -1.78
SCN11AQ9UI33 AC090281.1-201ENST00000523019 276 ntBASIC3.93□□□□□ -1.78
SCN11AQ9UI33 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 H3F3AP1-201ENST00000559984 334 ntBASIC3.93□□□□□ -1.78
SCN11AQ9UI33 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 AC024153.1-201ENST00000603103 365 ntBASIC3.93□□□□□ -1.78
SCN11AQ9UI33 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.93□□□□□ -1.78
SCN11AQ9UI33 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SCN11AQ9UI33 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SCN11AQ9UI33 SNORA9.2-201ENST00000365361 133 ntBASIC3.92□□□□□ -1.78
SCN11AQ9UI33 RHEBP3-201ENST00000411920 351 ntBASIC3.92□□□□□ -1.78
SCN11AQ9UI33 RPS12P5-201ENST00000423449 371 ntBASIC3.92□□□□□ -1.78
SCN11AQ9UI33 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.92□□□□□ -1.78
SCN11AQ9UI33 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.92□□□□□ -1.78
SCN11AQ9UI33 AC108734.1-201ENST00000439549 399 ntBASIC3.92□□□□□ -1.78
SCN11AQ9UI33 VN1R90P-201ENST00000595717 726 ntBASIC3.92□□□□□ -1.78
SCN11AQ9UI33 uc_338.1-201ENST00000612113 180 ntBASIC3.92□□□□□ -1.78
SCN11AQ9UI33 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.92□□□□□ -1.78
SCN11AQ9UI33 AC007336.1-201ENST00000576365 3828 ntBASIC3.92□□□□□ -1.78
SCN11AQ9UI33 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SCN11AQ9UI33 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SCN11AQ9UI33 AL592148.1-201ENST00000413568 445 ntBASIC3.91□□□□□ -1.78
SCN11AQ9UI33 FAR1P1-201ENST00000427163 934 ntBASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AC105918.1-201ENST00000474399 838 ntBASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AC091544.1-201ENST00000484702 348 ntBASIC3.91□□□□□ -1.78
SCN11AQ9UI33 OR5H3P-201ENST00000502817 919 ntBASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AC034159.1-201ENST00000513885 583 ntBASIC3.91□□□□□ -1.78
SCN11AQ9UI33 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AP002404.1-201ENST00000532005 451 ntBASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AC011602.1-201ENST00000546484 331 ntBASIC3.91□□□□□ -1.78
SCN11AQ9UI33 TUG1_1.1-201ENST00000610654 145 ntBASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AC018529.3-201ENST00000624212 2254 ntBASIC3.91□□□□□ -1.78
SCN11AQ9UI33 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 GABRG2-229ENST00000641017 3628 ntBASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 BDH2P1-201ENST00000602288 736 ntBASIC3.91□□□□□ -1.78
SCN11AQ9UI33 AC074140.1-201ENST00000621617 208 ntBASIC3.91□□□□□ -1.78
SCN11AQ9UI33 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN11AQ9UI33 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.9□□□□□ -1.78
SCN11AQ9UI33 MIR1261-201ENST00000408659 82 ntBASIC3.9□□□□□ -1.79
SCN11AQ9UI33 U3.42-201ENST00000408746 214 ntBASIC3.9□□□□□ -1.79
SCN11AQ9UI33 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.9□□□□□ -1.79
SCN11AQ9UI33 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.9□□□□□ -1.79
SCN11AQ9UI33 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.9□□□□□ -1.79
SCN11AQ9UI33 AC067852.4-201ENST00000590314 478 ntBASIC3.9□□□□□ -1.79
SCN11AQ9UI33 AC124856.1-201ENST00000600819 896 ntBASIC3.9□□□□□ -1.79
SCN11AQ9UI33 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SCN11AQ9UI33 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.9□□□□□ -1.79
SCN11AQ9UI33 AC012020.1-201ENST00000624541 1728 ntBASIC3.9□□□□□ -1.79
SCN11AQ9UI33 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SCN11AQ9UI33 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.89□□□□□ -1.79
SCN11AQ9UI33 RNA5SP293-201ENST00000410527 113 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 RNA5SP184-201ENST00000411071 108 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.89□□□□□ -1.79
SCN11AQ9UI33 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.89□□□□□ -1.79
SCN11AQ9UI33 HMGN1P18-201ENST00000457642 277 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 AL157394.1-201ENST00000562983 1224 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.89□□□□□ -1.79
SCN11AQ9UI33 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms