Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN1Q9P244 Y_RNA.493-201ENST00000384422 102 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 RNU6-952P-201ENST00000391164 108 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 U3.32-201ENST00000408116 212 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 AC093698.1-201ENST00000423843 571 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 PSMA6P3-201ENST00000428242 164 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 EZH2P1-201ENST00000431167 291 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 MUPP-201ENST00000438111 566 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 RNA5SP103-201ENST00000459503 118 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 RPL23AP56-201ENST00000460778 453 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 RN7SL354P-201ENST00000469282 294 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 RNU6-759P-201ENST00000516740 103 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 COX6CP8-201ENST00000522620 226 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 AC087373.1-201ENST00000524920 491 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 OR4R3P-201ENST00000525084 838 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 AC087276.1-201ENST00000529659 480 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN1Q9P244 AP001880.2-201ENST00000538233 448 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 AC053481.3-201ENST00000577881 843 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 Z99497.2-201ENST00000603634 310 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 CR381572.2-201ENST00000624852 397 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 MIR3974-201ENST00000637126 96 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN1Q9P244 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN1Q9P244 AC007390.2-201ENST00000606229 3803 ntBASIC4.5□□□□□ -1.69
LRFN1Q9P244 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN1Q9P244 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LRFN1Q9P244 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRFN1Q9P244 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRFN1Q9P244 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRFN1Q9P244 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC000123.3-201ENST00000624029 4975 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 RNU6-989P-201ENST00000362756 107 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 RNU1-32P-201ENST00000363937 159 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 RNA5SP505-201ENST00000364748 108 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 U3.15-201ENST00000365398 212 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 RNU6-723P-201ENST00000383973 107 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 SNORD116-2-201ENST00000384274 95 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 SNORD116-6-201ENST00000384711 96 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AL031679.1-201ENST00000400616 525 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 SNORA11-201ENST00000408789 128 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 RN7SKP100-201ENST00000411258 284 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC114755.2-201ENST00000413520 361 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 TBCAP2-201ENST00000416175 326 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 MTCO2P5-201ENST00000422621 426 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 DNAJC19P7-201ENST00000428811 344 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AL390023.1-201ENST00000428836 262 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC016712.1-201ENST00000431088 378 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 NRBF2P3-201ENST00000432731 865 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 MTCYBP39-201ENST00000437562 491 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 MTND5P14-201ENST00000441481 1267 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 HSPE1P28-201ENST00000443139 211 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 TPT1P12-201ENST00000448968 492 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC005297.2-201ENST00000450430 606 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC010733.1-201ENST00000451515 401 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 AL445669.2-201ENST00000454425 421 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 ARPC3P2-201ENST00000457786 533 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC093853.1-201ENST00000515689 483 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 RN7SKP276-201ENST00000516242 268 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 Y_RNA.688-201ENST00000516565 95 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 IGKV1-32-201ENST00000519290 311 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms