Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AL161781.1-201ENST00000354277 403 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 RNU6-28P-201ENST00000362378 107 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 RNA5SP223-201ENST00000365174 120 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 RNU5A-6P-201ENST00000384136 116 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 RPL31P45-201ENST00000419532 356 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 RPL36AP10-201ENST00000421785 322 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 OR8F1P-201ENST00000425243 930 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AL138785.1-201ENST00000425821 331 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 MTATP6P13-201ENST00000438531 667 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 RPL7AP61-201ENST00000443410 636 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 CEACAMP7-201ENST00000444105 496 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AL031584.1-201ENST00000447169 754 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC073850.1-201ENST00000449243 255 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 VDAC2P4-201ENST00000452925 711 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC079168.1-201ENST00000458741 345 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 FTH1P2-201ENST00000466086 412 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 RN7SL51P-201ENST00000468230 285 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 HMGB1P36-201ENST00000487709 576 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC093267.1-201ENST00000489176 961 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC023424.2-201ENST00000493479 777 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC073073.1-201ENST00000493920 463 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 RN7SL447P-201ENST00000494711 245 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 RN7SKP66-201ENST00000516681 231 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 RN7SKP277-201ENST00000516895 283 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 NRBF2P4-201ENST00000520874 850 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AL049779.2-201ENST00000553847 315 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 ELOCP28-201ENST00000590044 317 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC025588.3-201ENST00000604182 274 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC009597.2-201ENST00000604659 592 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AL390208.1-201ENST00000605885 644 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC010857.1-201ENST00000606398 594 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 U6atac.1-201ENST00000616025 117 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC068137.3-201ENST00000639191 341 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC073869.6-201ENST00000640656 341 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AC093535.2-201ENST00000624769 2326 ntBASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CCM2LQ9NUG4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 AP002001.2-201ENST00000529025 1469 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 AL022322.2-201ENST00000624072 20397 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 Y_RNA.41-201ENST00000362646 102 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 SNORA56-201ENST00000383966 129 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 RNU6-297P-201ENST00000384636 107 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 Y_RNA.582-201ENST00000391023 95 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 Y_RNA.608-201ENST00000410647 95 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 AL445669.1-201ENST00000426743 755 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 AC104651.1-201ENST00000427559 735 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 NANOGP6-201ENST00000429190 847 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 AC009238.2-201ENST00000431026 355 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 SDCBPP1-201ENST00000440192 890 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 AL031667.1-201ENST00000440222 725 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 HMGB1P15-201ENST00000453854 435 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 MTCO1P42-201ENST00000457379 726 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 RPL9P33-201ENST00000484311 566 ntBASIC4.94□□□□□ -1.62
CCM2LQ9NUG4 AC058823.1-201ENST00000485315 474 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms